Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02350 ATGGGGAACAAAATAGCGCGAACGACGCAAGTTTCAGCGTCGGAGTATTACCTACACGAGTTACCATCAACGTACAATTTAGTTCTGAAAGAAGTTCTTGGACGCGGTCGTTTCTTCAAATCGATTCAGTGTAAACACGATGAAGGTTTGGTTCTCGTTAAGGTTTATTTCAAACGTGGTGATTTCATCGATCTTTCTGATTATGAACGCCGATTATCTCAGATTAAAGATATTTTCATAACTATTGATCATCCTCATGTTTGGCCTTTTCAGTTTTGGCAAGAAACAGATAAAGCAGCTTACCTTTTGAGGCAATATTTCTTCCATAATTTGCATGACCGATTAAGCACTCGACCTTTTCTTAGTTTAGTTGAGAAGAAATGGTTGGCTTTTCAGTTGCTTTTAGGTGTAAAACAGAGCCACGAGAAGGGAGTGTGTCATGGTGATATCAAGTGTGAAAATGTGCTAGTTACGTCCTCAAATTGGCTTTACCTTGCTGACTTTGCATCTTTCAAACCCACATACATTCCGTATGATGACCCGTCTGATTTCTCTTTTTTCTTTGACACGGGTGGAAGAAGACTCTGTTATCTGGCGCCTGAGAGATTTTATGAAAATGGAGGGGAGATGCAGTTGGCACATGATGCCCCCCTAAAGCCATCTATGGATTTATTTGCTGTCGGGTGTGTAATTGCTGAGCTTTTCCTTGAGGGCCAACCGCTATTTGAACTGTCTCAACTTCTTGCGTATCGCAGAGGGCAACATGATCCAAGTCAACATCTTGAAAAAATACCAGATATTGGAATTCGCAAGATGATTCAACACATGATTCAGTTGGAACCAGAGTCTCGATTCTCTGCTGAAATATATCTAAAGGAATTTGCTGGAGTTGTATTCCCTACCTATTTTTCACCATTTCTGCATGATTTTTACCGTTGCTGGACTCCTCTCCATTCTGATATGAGGGTTTTACTCTGCCAGAGTGCTTTCCAGGAGATACTTAAACAAATGATGAACAAGCAGTCATCTGATGATGCATGTGTTACTTCTGGAGAGCTTTTAGAAGAGATGGTTGCCAAAGAAAGTGTGAGTTTCATGAAGGACTCGCGAAGGAAAAGAGAGGACATAGGAAAAGGATTAGTTCATGATCAGTATGAACTTCTTGGTGATATTAATAGCCTACTGAGGGATTCTAAAAATACTAAGTATCCATCTGGTCCTCAGCAAGTAACTGGAACCTTTCCTGAAAACCTAAAAAGTTTGCAGTCTCCTGGTGAGCTGCTTCAAACTATCTCGAATGCATTTCGAGGAAATGATCATCCCTTTTTGAGAAGTATTACTATGAACAACTTAAATTCATTGATGTCCGAGTATGATAGTCAGTCAGATACATTTGGAACGCCATTTCTACCGTTACCAAATGATAGTATGAGATGTGAAGGGATGGTTTTGATAACTTCTTTGTTGTGCTCATGCATACGCAATGTCAAGTTGCCTCACCTAAGGAGGGCAGCTGTACTCTTGTTGAAAGCTTCTGCCCTATATATTGATGATGAAGATCGGTTACAGCGTGTTATCCCATATGTAATTGCAATGCTTTCTGATCCAGCAGCAATTGTGCGTTGCGCTGCTTTGGAAACTTTGTGTGACATTCTTCCCATAGTGCGGGATTTTCCTCCCAGTGATGCAAAGATATTTCCCGAGTATATTTTTCCCATGCTTTCTATGCTTCCCGATGATCCTGAGGAAAGTGTGAGGATATGCTATGCCAGCAATATAGCTAAGCTGGCACTTACTGCTTATGGATTCTTGATACACTCAATAAGCTTGAGTGAAGCAGGTGTCCTTGATGAACTGAGTTTGCCACAAAAGCCATTGACATCATCCACTCAGACCTCTGGGAGAATGAAGATGATAAATAGTGATGTCCAGCTACTGCAACTGAGGAAATCAATTGCAGAGGTTGTTCAGGAACTTGTTATGGGTCCAAAGCAAACACCAAATATTAGGAGAGCACTTCTTCAGGACATCGGTAAACTTTGCTACTTCTTTGGTGTGAGACAGAGTAATGACACTCTCTTACCTATCCTTCCTGCCTTCTTAAATGATCGAGATGAGCAATTAAGGACGGTATTCTACGAAAAGATTGTTTACGTCTGTCTTTTTGTGGGCCAAAGAAGTGTAGAGGAATATCTATTACCTTACATTGAGCAAGCTTTAAGCGATATGACAGAAGCTGTCATTGTTAGAGCTTTAGAATGTTTGGCTATTCTATGCAAAAGTGGGTTCTTCCGGAAGAGGATATTGCTTCAAATGATAGAGCGTGCCTTTGCTTTATTGTGTTATCCTAGTGAATGGGTACGAAGATCGGTTGTCTCTTTCATTGCTGCTAGCAGTGAGAGCCTGGGTGCAGTGGATTCTTATGTTTTTCTTGCTCCTGTTATACGTCCTTTCCTTCGCAGACAGCCTGTGTCTCTTGCTTCAGAGAAAGCTCTTTTGTCATGTTTAAAACCTCCTGTCTCGAGACAGGTTTTCTATGAAGTTTTGGAGAACTCCAGGAGTTCGGATATGCTAGAAAGACAGAGAAAGATATGGTATAGTTCATCACAGTCTAAAATATGGGAAATGGATTTACTGAAAAAAGGAATCGATGAGTTGGACTTATTAAAGAGCTGGGCTGACAAGCAACATAGTCCCGGGCTTCAACAAACTGTTGGAACTACCCTCCAGCAGCCAGGACTAACTGATTGTGACAAAGCTGAGTCAAAATTAAGAGATATGGGGGCCTTTATGCATAATGACAGCAATATGGTAGGAAATCGTGAAACACAATGCTTGGACAAGTTACAGTTTTCGGGATTTATGTCACCAACCTTTAGTGGTGTTAACAGTTTAACATATGACAAGCCATCAGAAGGCATACCTTTATACTCCTTCAGTGTGGACAGGAGAGGAATGGGAGTACCTCCTGCAGCATCTGATTCTCCATTACAAATGAATTCTCTGGGTGTCAGTTCATCTGCAATGCCTTGGGTTAATCCACTTAGTAAGTCCTTTGATTTGGCCAATTCAGTTCCATCACCAAAGCTTTTTTCAGGTTCTTTTAGCATCAACAATGGTTCTAAACAGTTCCACCGAGTGGTACACGAACCAGATTCTAAGGAAAATGAGACAGCCTTTGCCACTAGCACATTTCAAGATGTGGGACTATCTTCTAATATTAAAGGTACATCAATTTCACTAGAAGATGCTACTGCCCAAGCTGATTTATCAGGATTTCAATCTTTTGCTCGAACATCCATCCCTGATTCTGGTTGGAAGCCGCGTGGGGTGTTGGTTGCACACCTCCAGGAGCACCGTTCAGCAGTTAGTGATATAGCAGTTTCTTCTGACAACAGCTTTTTTGTGAGTGCATCAGATGACTCTACAGTCAAGATTTGGGATTCCAGAAAGCTGGAAAAAGACATTTCATTCAGGTCAAAGCTAACTTATCACCTGGAGGGAAGCCATGCGTTATGTGTAGCAATGCTTCCAGGTTCAGCTCAAGTGATAGTTGGAGCATCTGATGGATTTATTCATATGTTTTCTGTTGATCATATCTCTAGAGGTCTAGGAAATGTTGTTGAGAAGTATTCTGGTATTGCTGATATCACAAAGAAGGACACCAAAGAAGGTGCCATACTTGGCCTATTAAATAGCCCCATGGATAATAATAGCATTATGTATAGCACCCAGAACTGTGGCATCCATCTATGGGATACGAGGTCAAATTCCAATTCTTGGACGCTGAAAGCTACTCCTGAGGAGGGCTACGCCTTGTCCTTAGCATCAGGGCCTTGTTCCAACTGGTTTGTATCAGGGTCTTCCAGGGGTGTAATTACACTTTGGGATCTGAGATTTCTTGTACCTGTAAACTCTTGGAAGTATTCTCTTGCATGTCCTATAGAAAAAATTTGTCTCTTCCTTCCTCCTCCAAATGCTTCTCTGTCTTCAACCACTAGGCCCCTTGTTTATGTGGCTGCGGGCTGCAATGAAGTTTCTCTTTGGAATGCGGAGAATGCTAGCTGCCACCAGGTATTGAGGACGGCCAATTATGACACTGATGCAGAAATATCTGATCTGCCTTGGGCCTTGGCCAAACCTTCAAGTAAGGCAACTTCTCAGTCAGATCCAAGACGAAATGTTAATCGCAAGTACAGAGTCGATGAGCTAAATGAGCCTCCGCCTCGTCTTCCCGGTATTCGAACATTACTTCCCTTACCAGGGGGTGATTTATTGACTGGTGGCACTGATTTAAAGATACGTCGGTGGGATCATTACAGTCCTGATAGAAGCTACTGCATTTGTGGACCAAACCTAAAAGGAGTTGGAATTGATGATTTTTATGAAACAAAATCTAGTTTTGGAGTGCAAGTTGTACAGGAGACAAAAAGACGTCCTCTTGCAACCAAGCTGACACCAAAGGCAATTCTTGCAGCTGCTGCCACTGATTCTGCCGGTTGCCATCGTGATTCTATTGTTTCTGTGGCTTCAGTTAAGTTAAACCAGAGACTTCTACTTTCAAGTGGTAGAGATGGGGCCATCAAGGTTTGGAAGTAA 4599 0.419 MGNKIARTTQVSASEYYLHELPSTYNLVLKEVLGRGRFFKSIQCKHDEGLVLVKVYFKRGDFIDLSDYERRLSQIKDIFITIDHPHVWPFQFWQETDKAAYLLRQYFFHNLHDRLSTRPFLSLVEKKWLAFQLLLGVKQSHEKGVCHGDIKCENVLVTSSNWLYLADFASFKPTYIPYDDPSDFSFFFDTGGRRLCYLAPERFYENGGEMQLAHDAPLKPSMDLFAVGCVIAELFLEGQPLFELSQLLAYRRGQHDPSQHLEKIPDIGIRKMIQHMIQLEPESRFSAEIYLKEFAGVVFPTYFSPFLHDFYRCWTPLHSDMRVLLCQSAFQEILKQMMNKQSSDDACVTSGELLEEMVAKESVSFMKDSRRKREDIGKGLVHDQYELLGDINSLLRDSKNTKYPSGPQQVTGTFPENLKSLQSPGELLQTISNAFRGNDHPFLRSITMNNLNSLMSEYDSQSDTFGTPFLPLPNDSMRCEGMVLITSLLCSCIRNVKLPHLRRAAVLLLKASALYIDDEDRLQRVIPYVIAMLSDPAAIVRCAALETLCDILPIVRDFPPSDAKIFPEYIFPMLSMLPDDPEESVRICYASNIAKLALTAYGFLIHSISLSEAGVLDELSLPQKPLTSSTQTSGRMKMINSDVQLLQLRKSIAEVVQELVMGPKQTPNIRRALLQDIGKLCYFFGVRQSNDTLLPILPAFLNDRDEQLRTVFYEKIVYVCLFVGQRSVEEYLLPYIEQALSDMTEAVIVRALECLAILCKSGFFRKRILLQMIERAFALLCYPSEWVRRSVVSFIAASSESLGAVDSYVFLAPVIRPFLRRQPVSLASEKALLSCLKPPVSRQVFYEVLENSRSSDMLERQRKIWYSSSQSKIWEMDLLKKGIDELDLLKSWADKQHSPGLQQTVGTTLQQPGLTDCDKAESKLRDMGAFMHNDSNMVGNRETQCLDKLQFSGFMSPTFSGVNSLTYDKPSEGIPLYSFSVDRRGMGVPPAASDSPLQMNSLGVSSSAMPWVNPLSKSFDLANSVPSPKLFSGSFSINNGSKQFHRVVHEPDSKENETAFATSTFQDVGLSSNIKGTSISLEDATAQADLSGFQSFARTSIPDSGWKPRGVLVAHLQEHRSAVSDIAVSSDNSFFVSASDDSTVKIWDSRKLEKDISFRSKLTYHLEGSHALCVAMLPGSAQVIVGASDGFIHMFSVDHISRGLGNVVEKYSGIADITKKDTKEGAILGLLNSPMDNNSIMYSTQNCGIHLWDTRSNSNSWTLKATPEEGYALSLASGPCSNWFVSGSSRGVITLWDLRFLVPVNSWKYSLACPIEKICLFLPPPNASLSSTTRPLVYVAAGCNEVSLWNAENASCHQVLRTANYDTDAEISDLPWALAKPSSKATSQSDPRRNVNRKYRVDELNEPPPRLPGIRTLLPLPGGDLLTGGTDLKIRRWDHYSPDRSYCICGPNLKGVGIDDFYETKSSFGVQVVQETKRRPLATKLTPKAILAAAATDSAGCHRDSIVSVASVKLNQRLLLSSGRDGAIKVWK 1532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02350 1532 SUPERFAMILY ARM repeat 416 820 IPR016024 -
Trre7g02350 1532 Gene3D - 1322 1532 IPR015943 GO:0005515
Trre7g02350 1532 Pfam Protein kinase domain 29 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g02350 1532 CDD STKc_Vps15 16 303 - -
Trre7g02350 1532 FunFam Protein kinase family protein / WD-40 repeat family protein 24 347 - -
Trre7g02350 1532 ProSiteProfiles HEAT repeat profile. 693 731 IPR021133 -
Trre7g02350 1532 Gene3D - 611 837 IPR011989 -
Trre7g02350 1532 ProSiteProfiles HEAT repeat profile. 525 557 IPR021133 -
Trre7g02350 1532 ProSiteProfiles Trp-Asp (WD) repeats profile. 1499 1532 IPR001680 GO:0005515
Trre7g02350 1532 SUPERFAMILY Protein kinase-like (PK-like) 26 304 IPR011009 -
Trre7g02350 1532 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1116 1148 - -
Trre7g02350 1532 FunFam Phosphoinositide 3-kinase regulatory subunit 4 1092 1157 - -
Trre7g02350 1532 FunFam Protein kinase family protein / WD-40 repeat family protein 621 831 - -
Trre7g02350 1532 SUPERFAMILY WD40 repeat-like 1113 1530 IPR036322 GO:0005515
Trre7g02350 1532 SMART WD40_4 1109 1148 IPR001680 GO:0005515
Trre7g02350 1532 SMART WD40_4 1404 1438 IPR001680 GO:0005515
Trre7g02350 1532 SMART WD40_4 1256 1297 IPR001680 GO:0005515
Trre7g02350 1532 SMART WD40_4 1159 1196 IPR001680 GO:0005515
Trre7g02350 1532 SMART WD40_4 1484 1532 IPR001680 GO:0005515
Trre7g02350 1532 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1499 1532 - -
Trre7g02350 1532 Pfam WD domain, G-beta repeat 1112 1148 IPR001680 GO:0005515
Trre7g02350 1532 Gene3D - 412 610 IPR011989 -
Trre7g02350 1532 Gene3D - 1159 1319 IPR015943 GO:0005515
Trre7g02350 1532 ProSiteProfiles Trp-Asp (WD) repeats profile. 1116 1148 IPR001680 GO:0005515
Trre7g02350 1532 FunFam phosphoinositide 3-kinase regulatory subunit 4-like 471 610 - -
Trre7g02350 1532 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672|GO:0006468
Trre7g02350 1532 Gene3D - 1100 1158 IPR015943 GO:0005515
Trre7g02350 1532 Gene3D Transferase(Phosphotransferase) domain 1 21 376 - -
Trre7g02350 1532 PANTHER PHOSPHOINOSITIDE 3-KINASE REGULATORY SUBUNIT 4 1 1532 IPR045162 GO:0004674|GO:0016236|GO:0045324
Trre7g02350 1532 SMART serkin_6 27 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g02350 1532 ProSiteProfiles Protein kinase domain profile. 27 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g02350 1532 Pfam HEAT repeat 525 554 IPR000357 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02350 Trre-Chr7 19082533 19090890 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g02350 29 288 MAP Kinase Gene Family AT2G01450 25.914 4.75e-12 68.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_Pl-Tthe Trre7g02350 Pkinase 9.9e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02350 K08333 - gmx:100818467 2734.13