Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02346 ATGGAATACTTACTTAATATTATGCTCCTCCTACTTCTAATGGCATTCACTTTTTATTTTCTACTTTCAAAATGGACAAAAAACAATTCAAACATGATAAACCTCCCACCAGGACCTACACCCCTTCCCTTCATAGGAAACCTCCATCAATTAGGAAAAAAGCCACACAAATCCTTAGCTAAATTAGCTGAAATTCATGGTCCAATCATGAGTCTAAAGTTAGGCCAAATAACAACTATAGTTATTTCTTCACCCAACATGGCCAAAGAAATACTCCAAACCTATGATCATTTCTTATCAAATAGAGTCATTCCTAATGCTGTACAAGTTCATGACCATCACAAATATAGCATTACATTCTTACCAATTTCACCTCTTTGGAGAGACTTAAGAAAAATATGCCATAATCAATTATTCTCTAACAAAAAACTTGATGAGAGTAAAGGAATTAGGAGTAAGAAACTTCAAGAATTTCTCAATGATATTAATCAAAGTAGTCTTATTAATGAAGCTGTTGATATTGGTAATATAGCGTTTAAGACGGCGATTAATTTGTTGTCAAACATAATTTTCTCTTTAGATTTGGTTGATTCTGTTGGTTCAGTTGGAGATTTCAAGGAGCTAGTTGTGAATATAATGGAAGAATGTGGAAAACCAAACATTGCTGATCTTTTTCCTACATTGAACATGTTTGATCCACAAGGTATTAAAAGTCGTTCATGTGTTTATGCTGGCAAGATTATTGAAATCTTCCAACGTTTGATTGAGCATAGGTTGAAGTTGAGGGAAGTCCAAGGTTTTGACACAAACAATGATATGTTAAATACATTTCTCAACATTGATCAAGCCAACAACCAAGATATAAACAAAAACAAAATCCAACATTTATCTCTGACTTTATTTGTTGCGGGTACAGATACAATTTCATCTACGCTAGAATGGGCAATGGCAGAATTGCTCAAAAATGAAAAGGTTATGTCAAAAGCAAAACATGAGTTGGAACTAATAATTGGCAAAGGAAACTCAGTTGAGGAATCGGATATTTCAAAGCTTCCTTACTTACAAGCAATAGTAAAAGAGACTTTTCGATTGCATCCTCCAGTTCCTTTTTTAATCCCCAGAAAAGCCAATGCCAATGTGGAAATTTGTGGCTACACAATCCCAAAAGATGCACATGTGTTGGTCAATATATGGACCATTGGTAGAAATTCAAGTATTTGGGAAAATGCAAATTTGTTTTCACCAGAGAGATTTTTAAAATCGAAAATTGATGTTAAAGGTCACAATTTTGAGCTTATACCATTTGGCGCTGGAAGGAGAGTTTGTCCCGGTTTATTGTTGGCTACCAGGATGTTGTATTTGATGTTAGGCTCATCAATCAATTGTTTTAATTGGAAATTTGAAGATGGAATGAAAATAGACGATATGAAAATGGAGGACAAATTTGGGATCACATTAACAAAGGCACAACCAGTAAGAATCATTCCAGAAAGAAAGAAAAATACAATTAACTAG 1515 0.3393 MEYLLNIMLLLLLMAFTFYFLLSKWTKNNSNMINLPPGPTPLPFIGNLHQLGKKPHKSLAKLAEIHGPIMSLKLGQITTIVISSPNMAKEILQTYDHFLSNRVIPNAVQVHDHHKYSITFLPISPLWRDLRKICHNQLFSNKKLDESKGIRSKKLQEFLNDINQSSLINEAVDIGNIAFKTAINLLSNIIFSLDLVDSVGSVGDFKELVVNIMEECGKPNIADLFPTLNMFDPQGIKSRSCVYAGKIIEIFQRLIEHRLKLREVQGFDTNNDMLNTFLNIDQANNQDINKNKIQHLSLTLFVAGTDTISSTLEWAMAELLKNEKVMSKAKHELELIIGKGNSVEESDISKLPYLQAIVKETFRLHPPVPFLIPRKANANVEICGYTIPKDAHVLVNIWTIGRNSSIWENANLFSPERFLKSKIDVKGHNFELIPFGAGRRVCPGLLLATRMLYLMLGSSINCFNWKFEDGMKIDDMKMEDKFGITLTKAQPVRIIPERKKNTIN 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02346 504 CDD CYP76-like 63 496 - -
Trre7g02346 504 Gene3D Cytochrome P450 20 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g02346 504 FunFam Cytochrome P450 76C4 27 495 - -
Trre7g02346 504 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 435 444 IPR017972 GO:0005506|GO:0016705
Trre7g02346 504 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 10 497 - -
Trre7g02346 504 Pfam Cytochrome P450 36 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g02346 504 SUPERFAMILY Cytochrome P450 36 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g02346 504 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g02346 504 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g02346 504 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g02346 504 PRINTS E-class P450 group I signature 432 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g02346 504 PRINTS E-class P450 group I signature 442 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g02346 504 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g02346 504 PRINTS E-class P450 group I signature 396 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g02346 504 PRINTS P450 superfamily signature 433 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g02346 504 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g02346 504 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g02346 504 PRINTS P450 superfamily signature 442 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02346 Trre-Chr7 19032273 19034630 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g02346 1 504 Cytochrome P450 AT2G45550 43.860 1.78e-158 458
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02346 - - lja:Lj0g3v0208479.2 657.136