Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02324 ATGGGAGGTGGAGGAGGTATCATGAATGAAGAAGAAAACAAATGGCCACCATGGTTACAACCACTTCTTCAAACAAGTTTCTTTGTTCAATGCAAAGTCCACTCAGATTCACATAAGAGTGAATGTAATATGTTTTGTTTGGATTGTGTTAATGGTGCTCTTTGTTCTGCTTGTCTTGTTTCTCACAAACAACATAGAACAATTCAGATAAGAAGGTCTTCATACCATGATGTGATAAGGGTTTCTGAGATACAGAAATTTCTTGACATAACAGAAGTTCAAACCTATGTTATAAACAGTGCAAAGATTGTGTTCTTGAATGAAAGGCCTCAACCTAGGCCTGGTAAAGGGGTCACCAATACCTGCCAAGTTTGTGACCGTAGCCTCCTTGATTCCTTCAACTTCTGCTCTCTTGGTTGTAAGATTGTTGGAACCTCCAAGAAGTTGAGGAAGAATAAAATGTTAAGTCAGAAAGATGGATCTGATGGTGAAGACTCAATGAATGGCATTAGCAATGGAAGTGGAAGAAACAAAATCCATAGCTTTACACCTTCAACACCACCTCCAACAGTTGTGAATTACAGAACAGTGAAGAGAAGGAAAGGAGTTCCACATAGAGCTCCAATGGGAGGAGGAATCATTATAGAATACTGA 654 0.3914 MGGGGGIMNEEENKWPPWLQPLLQTSFFVQCKVHSDSHKSECNMFCLDCVNGALCSACLVSHKQHRTIQIRRSSYHDVIRVSEIQKFLDITEVQTYVINSAKIVFLNERPQPRPGKGVTNTCQVCDRSLLDSFNFCSLGCKIVGTSKKLRKNKMLSQKDGSDGEDSMNGISNGSGRNKIHSFTPSTPPPTVVNYRTVKRRKGVPHRAPMGGGIIIEY 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02324 217 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 10 209 - -
Trre7g02324 217 MobiDBLite consensus disorder prediction 153 192 - -
Trre7g02324 217 MobiDBLite consensus disorder prediction 161 192 - -
Trre7g02324 217 Pfam PLATZ transcription factor 71 142 IPR006734 -
Trre7g02324 217 CDD Bbox2 31 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02324 Trre-Chr7 18841545 18843230 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Trre7g02324 PLATZ 2.1e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02324 - - gmx:100810757 384.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g02324 7 18841545 18843230 Trre9g00162 9 1280213 1282636 ECH
Trre7g02324 7 18841545 18843230 Trre7g02324 7 18841545 18843230 ECH