Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02306 ATGAAGATCCTTTACTCCAAACTCAACTCTCTTCTCCCTAATTCTAATCCCAAGGAATTGGCGTTACCGTTACCGGACCAAGTAGATGAGGCAATAAACTACATAAAGAGGTTAGAGGCAAATGTGAAGATCGCTAAGGAGAAGAAAGAGATGTTATTAGAAGGAAAGAAAAAAAGATCGCGCAAATATTGTTCGGATCTACCAAAATTGTCACGTTTTGAAATTTACGAAAATGGCTCTTCTCTACAAATCATTCTCACGTGTGGATTAGATGACCGGTTCATTTTCTATGAAATCATTCGCGTGTTGCATGAAGAGAATATAGACGTCAGAAGTGTCAATTCTTCTACTGTTGGAGATAATTCACTCCTTCATGTTGTGCATGCTGAGATTCCTCAATCTTGTGTTCAATTTGGAGCAACAAAAGTGAGTGAGAGATTAAAAAGATTTGTGAATGGATCCTCCAGTGATGTAGAAATGCAGCCTGATGATTTGTGGGATTTTGAAATTGAAACTGATTTGTGGGGTTTAATTTCTAGCTAG 543 0.3775 MKILYSKLNSLLPNSNPKELALPLPDQVDEAINYIKRLEANVKIAKEKKEMLLEGKKKRSRKYCSDLPKLSRFEIYENGSSLQIILTCGLDDRFIFYEIIRVLHEENIDVRSVNSSTVGDNSLLHVVHAEIPQSCVQFGATKVSERLKRFVNGSSSDVEMQPDDLWDFEIETDLWGLISS 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02306 180 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 1 151 - -
Trre7g02306 180 Coils Coil 28 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02306 Trre-Chr7 18638244 18639043 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g02306 1 153 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 37.952 1.90e-22 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02306 - - tpra:123913718 317.775
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g02306 7 18638244 18639043 Trre7g02306 7 18638244 18639043 ECH
Trre11g04110 11 54018860 54021046 Trre7g02306 7 18638244 18639043 PCT