Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02278 ATGGCTTCAATTTCATCTTCTCATTCTTTTACAACTTGTCTTTTATTCCTGTTTTTTCTATATTTATCTTGTTTCTTCAACAACCTTAATGCAAAACACAGCATAACCAACATTCACAAGAACCAGCATAGGCACAATAAGCACCTCCATAATCCACCATTAAACCTAAGACTCTACCGCGCTTTTCTTGCACTGCAAGCATGGAAACATGTTATCTACTCAGACCCAAAAAACATCACTGCCAATTGGGTAGGTCCTTCAGTTTGCAACTATACTGGTATTTACTGTGCTCCATCTCTTGATGATCCTAAACTAACTGTTGTCGCCGGCATTGATCTTAACCACGCAGACATAGCCGGTTTTCTACCCGACGAATTAGCCTTCCTAAGTGACCTTTCACTTCTCCACCTCAATAGCAATCGTTTCTGCGGCATCATTCCAAAAACCTTCACCAACCTAACTCATCTCTATGAGCTTGACCTTAGCAATAACAGATTCGTTGGACCTTTTCCTTCGGTCGTTCTTTCACTTCCTTCCCTTACCTACCTCGACCTTCGTTACGACGAATTCGAAGGTCCACTACCTCCTCAGCTTTTCGACAAACCTTTCGATGCTTTCTTCCTTAACAACAATCGCTTCACAAGTTCTATTCCAACAAATTTAGGGAAAAGCAAAGCTTCTGTCATGGTTTTCGCTAATAACAAATTTGGAGGATGTTTACCAGAAAGCATAGTAAATTTCGCCGATACTTTAGAAGAACTTCTCTTAATCAACACAAGCATTTCAGGTTGTCTTCCACAACAAGTTGGTTTTCTATACAAATTAAGAGTTTTAGATGTGAGTTTCAACAACATTGTTGGTACTATACCTTATAGTCTTGCAGGGTTATCTCATTTGGAACAGTTAAATTTAGGACATAATATGATGAGTGGAATAGTTCCTATGGGAGTTTGTGAGTTACCAAACTTAGTTAATTTCACTTTTTCTTACAATTTCTTCTGTGAAGAAGAGGGAATTTGTAAGAATTTGACATCAAAGAACATAGTTTTTGATGATCGGCGTAATTGCTTGCCGGAGAAGGCACTGCAGAGAAGTGAAAAGGAATGTAGTGACAAACTTGAACAACCACCAGTTGATTGCTTTGAGGTTTGTTGTGTTGGTTTTGGGAATAATGTTAGTGCTGGTTCTGTGGCTATTCCACCTTCTGCAATTTCAGCACCAATGCCTGTTTCTCCTGCACCTCTTGTTGCACCAAGTTACCCTTTACCTTAA 1272 0.3931 MASISSSHSFTTCLLFLFFLYLSCFFNNLNAKHSITNIHKNQHRHNKHLHNPPLNLRLYRAFLALQAWKHVIYSDPKNITANWVGPSVCNYTGIYCAPSLDDPKLTVVAGIDLNHADIAGFLPDELAFLSDLSLLHLNSNRFCGIIPKTFTNLTHLYELDLSNNRFVGPFPSVVLSLPSLTYLDLRYDEFEGPLPPQLFDKPFDAFFLNNNRFTSSIPTNLGKSKASVMVFANNKFGGCLPESIVNFADTLEELLLINTSISGCLPQQVGFLYKLRVLDVSFNNIVGTIPYSLAGLSHLEQLNLGHNMMSGIVPMGVCELPNLVNFTFSYNFFCEEEGICKNLTSKNIVFDDRRNCLPEKALQRSEKECSDKLEQPPVDCFEVCCVGFGNNVSAGSVAIPPSAISAPMPVSPAPLVAPSYPLP 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02278 423 Gene3D Ribonuclease Inhibitor 232 370 IPR032675 -
Trre7g02278 423 SUPERFAMILY L domain-like 62 339 - -
Trre7g02278 423 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 18 400 - -
Trre7g02278 423 Gene3D Ribonuclease Inhibitor 62 231 IPR032675 -
Trre7g02278 423 Pfam Leucine rich repeat 132 188 IPR001611 GO:0005515
Trre7g02278 423 Pfam Leucine rich repeat 274 331 IPR001611 GO:0005515
Trre7g02278 423 FunFam Leucine-rich repeat extensin-like protein 1 62 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02278 Trre-Chr7 18258326 18259597 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g02278 55 412 Trihelix Transcription Factor Family AT2G15880 51.397 8.08e-132 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02278 - - gmx:100802803 628.632