Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02229 ATGAGTTCAGGAAGCAGCAAAGACAAAGAGAAAGCGAGAGTGAGTCGCACGTCACTGATACTATGGCACGCTCATCAAAACGACGCCGCTGCGGTTAGGAAGCTTCTTCAAGAAGATCCTTCTCTTGTCAATGCTACAGATTACGATAATCGCACTCCTCTTCACGTCGCTTCTCTCCATGGCTGGATCGATGTCGCCAAATGCTTAATTGAATTCGGCGCTGATGTCAACGCTCAAGATCGTTGGAAAAACACCCCTTTGGCTGATGCAGAAGGATCTAAAAGGACTAATATAATTGAGCTTTTGAAATCACATGGAGGATTGTCTTATGGCCAAACTGGAAGTCATTTTGAACCCAGGGTGGTTCCGCCACCGTTGCCTAACAAGTGTGACTGGGAAGTTGATCCCTCTGAGCTTGACTTCTCAAGTGCTGCGCGTATCGGAAAGGGATCTTTCGGTGAGATTTTGAAAGCCCATTGGCGTGGAACGCCAGTTGCTGTCAAGCGCATTCTTCCATCTCTTTCAGAAGATAGAATGGTGATTCAGGACTTTAGGCATGAGGTCAATTTATTGGTGAAGCTTCGGCACCCCAATATAGTTCAGTTTCTTGGTGCTGTTACCGACAGGAAGCCCCTCATGTTAATTACTGAGTATCTAAGAGGGGGTGATCTTCACCAATACCTCAAAGATAAAGGTGCACTTAGCCCTTCAACAGCAATCAACTTTTCCATGGATATTGCTAGAGGAATGGCTTATCTTCACAATGAACCAAATGTTATAATTCATAGAGACCTAAAGCCAAGGAATGTTCTTTTAGTCAACTCTAGTGCTGACCATTTAAAAGTTGGAGATTTTGGATTGAGTAAGCTTATCACTGTCCAGAGTTCTCATGATGTATACAAGATGACCGGTGAAACTGGGAGCTATCGCTATATGGCTCCGGAAGTTTTCAAACATCGGAGGTATGAGAAGAAGGTTGATGTATACTCCTTTGCAATGATTTTGTATGAGATGCTTGAAGGAGAACCACCTTTTGCAAGTTATGAACCTTATGATGGAGCAAAACATGCAGCTGAAGGGCACAGGCCTGCTTTTCGAGCAAAGGGTTATATCCCTGAATTGCAAGAGTTAACGCAGCAGTGTTGGGCTGCTGATATGAACCAAAGACCTCATTTCATTGAGATCCTTAAGCGGCTTGAAAAGATCAAGGAAAATCTACCTTCAGATCATCACTGGCACTTGTTCACGTCATAA 1254 0.4394 MSSGSSKDKEKARVSRTSLILWHAHQNDAAAVRKLLQEDPSLVNATDYDNRTPLHVASLHGWIDVAKCLIEFGADVNAQDRWKNTPLADAEGSKRTNIIELLKSHGGLSYGQTGSHFEPRVVPPPLPNKCDWEVDPSELDFSSAARIGKGSFGEILKAHWRGTPVAVKRILPSLSEDRMVIQDFRHEVNLLVKLRHPNIVQFLGAVTDRKPLMLITEYLRGGDLHQYLKDKGALSPSTAINFSMDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLITVQSSHDVYKMTGETGSYRYMAPEVFKHRRYEKKVDVYSFAMILYEMLEGEPPFASYEPYDGAKHAAEGHRPAFRAKGYIPELQELTQQCWAADMNQRPHFIEILKRLEKIKENLPSDHHWHLFTS 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02229 417 SUPERFAMILY Protein kinase-like (PK-like) 140 412 IPR011009 -
Trre7g02229 417 ProSitePatterns Serine/Threonine protein kinases active-site signature. 260 272 IPR008271 GO:0004672|GO:0006468
Trre7g02229 417 ProSiteProfiles Ankyrin repeat region circular profile. 49 81 - -
Trre7g02229 417 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 79 404 - -
Trre7g02229 417 Gene3D - 2 116 IPR036770 -
Trre7g02229 417 PIRSF ILK 2 417 - -
Trre7g02229 417 FunFam serine/threonine-protein kinase STY46-like 134 220 - -
Trre7g02229 417 FunFam Integrin-linked protein kinase family 220 415 - -
Trre7g02229 417 Gene3D Phosphorylase Kinase; domain 1 127 220 - -
Trre7g02229 417 Gene3D Transferase(Phosphotransferase) domain 1 221 413 - -
Trre7g02229 417 ProSiteProfiles Ankyrin repeat profile. 49 81 IPR002110 GO:0005515
Trre7g02229 417 SMART ANK_2a 49 78 IPR002110 GO:0005515
Trre7g02229 417 Pfam Protein tyrosine and serine/threonine kinase 145 399 IPR001245 GO:0004672|GO:0006468
Trre7g02229 417 ProSitePatterns Protein kinases ATP-binding region signature. 147 168 IPR017441 GO:0005524
Trre7g02229 417 CDD STKc_MAP3K-like 147 399 - -
Trre7g02229 417 SMART serkin_6 141 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g02229 417 ProSiteProfiles Protein kinase domain profile. 141 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g02229 417 SUPERFAMILY Ankyrin repeat 20 107 IPR036770 -
Trre7g02229 417 Pfam Ankyrin repeats (many copies) 35 87 IPR002110 GO:0005515
Trre7g02229 417 PRINTS Tyrosine kinase catalytic domain signature 254 272 IPR001245 GO:0004672|GO:0006468
Trre7g02229 417 PRINTS Tyrosine kinase catalytic domain signature 216 229 IPR001245 GO:0004672|GO:0006468
Trre7g02229 417 PRINTS Tyrosine kinase catalytic domain signature 370 392 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02229 Trre-Chr7 17846961 17853620 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g02229 2 417 MAP Kinase Kinase Kinase AT1G14000 83.654 0.0 727
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Trre7g02229 PK_Tyr_Ser-Thr 4.9e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02229 - - gmx:100793237 784.252