Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02221 ATGGAGAGTAATACAAACTCTGAACTCCCTCCTGGTTTTAGATTTCACCCAACAGATGAGGAACTAATTGTGCATTATCTTTGTAATCAAGCCACATCAAAGCCTTGCCCTGCATCTATTATTCCAGAAGTTGATATCTATAAATTTGATCCATGGGAATTGCCTGATAAATCTGAGTTTGAAGAGAATGAATGGTATTTCTTTAGCCCAAGAGAAAGAAAGTACCCAAATGGGGTGAGGCCTAATAGAGCAACTTTATCTGGATATTGGAAAGCTACTGGCACAGACAAGGGAATCAATAGTGGATCAAAGCAAATTGGGGTGAAGAAATCTTTGGTCTTTTACAAGGGTAGGCCACCAAAGGGTATCAAAACTAATTGGATTATGCATGAGTATAGATTGATTGGATCTCAAAAACAAACTAGCAAGCATATTGGATCCATGAGACTAGATGACTGGGTTTTGTGCAGAATCTATAAGAAGAAACACATGGGAAAAACATTGCAGCAAAAAGAGGACTATTCAACACTTCAATTTAATGATTCCACAATAGCAAATAATGATGGTGAACAAGAAATGATGAACATGAACCTAACAAGGACTTGTTCCCTTACCTATCTATTGGATATGAATCACTTTGGTCCAATTTTATCTGATGGTTCAACCTTTGATTTTCAAATACACAATTCAAATATTGGAATAGACCCTTTTGTAAAACCTCAACAAGTTCAAATGACTAACTATTATGAACCAGATTCACAGAGTAGCATCACCACCAATCAGCCAATATTTGTGAAGCAAATGCATAATTATTTAGGATAA 822 0.3601 MESNTNSELPPGFRFHPTDEELIVHYLCNQATSKPCPASIIPEVDIYKFDPWELPDKSEFEENEWYFFSPRERKYPNGVRPNRATLSGYWKATGTDKGINSGSKQIGVKKSLVFYKGRPPKGIKTNWIMHEYRLIGSQKQTSKHIGSMRLDDWVLCRIYKKKHMGKTLQQKEDYSTLQFNDSTIANNDGEQEMMNMNLTRTCSLTYLLDMNHFGPILSDGSTFDFQIHNSNIGIDPFVKPQQVQMTNYYEPDSQSSITTNQPIFVKQMHNYLG 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02221 273 SUPERFAMILY NAC domain 6 161 IPR036093 GO:0003677|GO:0006355
Trre7g02221 273 Gene3D NAC domain 18 165 IPR036093 GO:0003677|GO:0006355
Trre7g02221 273 ProSiteProfiles NAC domain profile. 9 161 IPR003441 GO:0003677|GO:0006355
Trre7g02221 273 Pfam No apical meristem (NAM) protein 10 134 IPR003441 GO:0003677|GO:0006355
Trre7g02221 273 FunFam NAC transcription factor 18 165 - -
Trre7g02221 273 PANTHER NAC TRANSCRIPTION FACTOR 56 9 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02221 Trre-Chr7 17749536 17751128 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g02221 1 224 NAC Transcription Factor Family AT1G69490 64.255 9.67e-111 319
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Trre7g02221 NAM 1.1e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02221 - - gmx:100785110 403.675