Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02212 ATGGATCAGCAAAACCAAAGTATGCGTTTGGTTCTTTCTACTGATGCTAAGCCTAGGCTGAAATGGACTCATGAACTTCACCAAAGATTTTCTGAGGCAATTAACCAGCTTGGAGGTGCAGAAAAGGCAACACCAAAGAGTCTTATGAGGGTGATGGGGATTCCAGGACTCACTTTATACCATCTCAAAAGCCACTTACAGAAATATAGACTTGGTAAAAGCCAACAGGTAGAAACATGTTCTGACAACAAACAAGATTATATAGAAATCCAAAGCACTGGTAGTAGTCAATGCAGCAGAGAAATCAGTGTTGGAAACCAGAATCAAACGGCTGAAAGCTTGAAGATTTCTGAGGCTCTCCAAATACAAATGGAAGTACAAAAGAAACTTTATGAACAAATTGAGGTGCAGAAACATTTACAGTTTAGAATTGAAGCTCAAGGAAAGTACTTACAATCGGTACTAATGAAGGCACAAGAAGCACTTGCAGGACACGGTTCTTCTTCGACAACGGGTGTAGAACATGCTAAAGATGAACTTTCTCAGTTATTATCAATAATCAACAATGCATGTCCTAGTTCTCCCATTTCAGAACTAACAGAAACAAGAGGTTTAAGTTTAAACTTTGGTGAGACGAAACAAAATAGAGGAACCATGTGTTCTCTAGAAAGTTCTCTTACATCATCTGAAAGCTCTGAGAGAAAAGAGGAAAATCAAACTATAAATGAGGCAGAAAACTCTCCAAATTATAATAGTATTTTAGTTGAATTGCCACCAATTTCCATTGAAACAGAAAGTAAAACATTCAGGACTGATACAAAAAATGATGAAGCTAGTGGTATAAAGAGAAGTGCAAGTACTGATTTAGATGGTGGTTGTGTTGATCAATCAGATGGAAAAAGATGTGGCAAAAAATTGAGGAAATCTCAGTTGTCACAAATGCTTGACTTGAACATAAAATATGAGAGAGACATTGACTTAAGTTCCTCAGAAATAGATTTAAATTGTAGTTCAAGCTTTTAA 1023 0.3646 MDQQNQSMRLVLSTDAKPRLKWTHELHQRFSEAINQLGGAEKATPKSLMRVMGIPGLTLYHLKSHLQKYRLGKSQQVETCSDNKQDYIEIQSTGSSQCSREISVGNQNQTAESLKISEALQIQMEVQKKLYEQIEVQKHLQFRIEAQGKYLQSVLMKAQEALAGHGSSSTTGVEHAKDELSQLLSIINNACPSSPISELTETRGLSLNFGETKQNRGTMCSLESSLTSSESSERKEENQTINEAENSPNYNSILVELPPISIETESKTFRTDTKNDEASGIKRSASTDLDGGCVDQSDGKRCGKKLRKSQLSQMLDLNIKYERDIDLSSSEIDLNCSSSF 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02212 340 MobiDBLite consensus disorder prediction 218 249 - -
Trre7g02212 340 Pfam Myb-like DNA-binding domain 19 70 IPR001005 -
Trre7g02212 340 MobiDBLite consensus disorder prediction 268 283 - -
Trre7g02212 340 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 4 261 IPR044848 GO:0003700
Trre7g02212 340 MobiDBLite consensus disorder prediction 268 293 - -
Trre7g02212 340 Pfam MYB-CC type transfactor, LHEQLE motif 115 160 IPR025756 -
Trre7g02212 340 SUPERFAMILY Homeodomain-like 16 72 IPR009057 -
Trre7g02212 340 Gene3D - 16 74 - -
Trre7g02212 340 FunFam Myb family transcription factor 16 74 - -
Trre7g02212 340 NCBIfam myb-like DNA-binding domain, SHAQKYF class 17 72 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02212 Trre-Chr7 17605274 17606802 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g02212 1 290 G2-like Transcription Factor Family AT1G69580 48.693 7.52e-79 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Trre7g02212 Myb_DNA-binding 6.9e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02212 - - gmx:100805252 433.721
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g02212 7 17605274 17606802 Trre7g02212 7 17605274 17606802 ECH