Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02208 ATGGAAATTCTTGGTTTCATGATTATAGTTTCCTATATACTTGTTTACTCTATCAATTTTTCCATAGCAGATGATTCTCTTGGTTTGTCACAATCAATCAGCAATAATAATACCTTGGTGTCGAAAAGTGGAAGATTTGAACTTGGTTTCTTCACTCCAGGTAACTCTAACAAAACTTACCTTGGTATTTGGTACAAGAACATTCCTGTTCAAAATATTGTTTGGGTTGCAAACAGAAACAATCCCATCAATAGTACTTCAAACTACACATTAAACCTCAACAGCACAGGAAACCTTGTCCCCACTCAAAATAGCTCCTTTGTTTGGTACACAACGACGAACGAAAAACAAGTGCGTAATCCAGTGGCGGTGCTCTTAGACAGTGGCAATCTTGTGGTAAAAAATGAAGGAGAAACAAACCAAGATGAGTATTTTTGGCAGAGTTTTGATTATCCATCAGATACCTTTTTAGAAGGAATGAAATTAGGAAGGAATCTAAGAAACGGTCACGATTGGAAATTAACGTCTTGGAAAAGTCCCGAAGATCCATCCATAGGAGATGTTTCTTGGGGTTTAGTGCTCAATGATTATCCTGAGTATTATATGATGAATGGAAGTGAAAAAGTTTTCAGGATTGGACCATGGAATGGTTTACACTTTAGTGCATTACCAGAACAAGTTTCAAACTCGTTCATACATTACGAGATTGTTTCCAACGATAATGAAATCTTCTATTCATACAGCATCAAGAGCAATACCGTTATCTCAAAAGTAGTAGTCGACCAAACAAAAGAACATCGCTATGTATGGGATGAACAAGAACATAATTGGAGGACATATGTAACACTTCCTAAAGATTTTTGTGACACTTATGGTCTTTGTGGACCTTATGGAAATTGCATAATGACACAACAACAGTTTCAAGATGGTGGACAAGATCTCTATATTCGGATGTTTGGTTCCGAGATAGTCAACAGTGAAGAACCTGAACATAGGCACAAAAGGAACAACACAGCGGCCAAAGTATCTACCATTGTTATTTTAGTTTTTGGGGTGCTTTTGGTGTGTATTTATTTAATCTGCAGAGTTCAGAAGAAGACTGTAGATAAAAATCCGGAAAGATCAGAAAGGCATGTAGATGATCTCGATCTCCCATTGTTTGATCTGCCAACAATTTCCACTGCAACTAATGGCTTCTCCAAAAACAATAAAATTGGCAAAGGTGGTTTTGGAACTGTGTATAAGGGAAATTTAACCAATGATCAAGAAATTGCTGTTAAGAGACTTTCAAGCATTTCGGGACAAGGAATGACCGAGTTCATAAATGAAGTAAAGTTAATAGCAAAACTTCAACACCGAAATCTAGTAAAGCTACTAGGTTGTTGCATTGAAGGAGAACAAATGTTGATTTATGAATATATGGTTAATGGTAGCCTAAACTCCTTCATTTTTGACAATACCAAGAGTAAATTGTTAGATTGGCCAAAACGATTCAACATAATTTGTGGAATTGCTAGGGGACTTTTGTATCTTCACCAAGATTCTCGATTAAGGATTATCCATAGAGACCTTAAAGCAAGTAATGTTTTACTCGACGATAGTTTGAATCCAAAAATATCCGATTTTGGAACAGCTAGAACTTTCGGAGGAGACCATTACGAAGGAAACACAAAGAGAATAATTGGGACTTATGGATACATGGCACCGGAGTATGCTGTTGATGGATTGTTTTCAGTGAAATCTGACGTTTTTAGCTTCGGAATTTTATTATTGGAGATTATATGTGGCAAAAGAAATAGAGCATATTATCACACAGATGGGACTCTAAACCTTGTTGGCCAAGCATGGTCAGTATGGAAAGAGAATAGAGCTTTAGAGTTGATTGACATAAACATAGGTGAAACTTTTGTTGTATCGGAAGTGTTGCGTTGTATGCACGTTAGTCTCTTGTGTGTACAGCAGAATCCTGAAGATAGGCCTACAATGGCCTCTGTGATTCTAATGTTGGGGAGTACTGAGATGGAATTAGGGGAACCTAAAGAACCTGGTTTCATTTCCAAAAATGTTTCAACAGAGTCAAATTCATCGACCAATGCAAAAGATTGTAGTTCAGTAAATGAAATGACCATTACCTTATTAGATGCTCGATGA 2151 0.3682 MEILGFMIIVSYILVYSINFSIADDSLGLSQSISNNNTLVSKSGRFELGFFTPGNSNKTYLGIWYKNIPVQNIVWVANRNNPINSTSNYTLNLNSTGNLVPTQNSSFVWYTTTNEKQVRNPVAVLLDSGNLVVKNEGETNQDEYFWQSFDYPSDTFLEGMKLGRNLRNGHDWKLTSWKSPEDPSIGDVSWGLVLNDYPEYYMMNGSEKVFRIGPWNGLHFSALPEQVSNSFIHYEIVSNDNEIFYSYSIKSNTVISKVVVDQTKEHRYVWDEQEHNWRTYVTLPKDFCDTYGLCGPYGNCIMTQQQFQDGGQDLYIRMFGSEIVNSEEPEHRHKRNNTAAKVSTIVILVFGVLLVCIYLICRVQKKTVDKNPERSERHVDDLDLPLFDLPTISTATNGFSKNNKIGKGGFGTVYKGNLTNDQEIAVKRLSSISGQGMTEFINEVKLIAKLQHRNLVKLLGCCIEGEQMLIYEYMVNGSLNSFIFDNTKSKLLDWPKRFNIICGIARGLLYLHQDSRLRIIHRDLKASNVLLDDSLNPKISDFGTARTFGGDHYEGNTKRIIGTYGYMAPEYAVDGLFSVKSDVFSFGILLLEIICGKRNRAYYHTDGTLNLVGQAWSVWKENRALELIDINIGETFVVSEVLRCMHVSLLCVQQNPEDRPTMASVILMLGSTEMELGEPKEPGFISKNVSTESNSSTNAKDCSSVNEMTITLLDAR 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02208 716 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 474 677 - -
Trre7g02208 716 Pfam S-locus glycoprotein domain 210 305 IPR000858 GO:0048544
Trre7g02208 716 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 20 149 - -
Trre7g02208 716 SUPERFAMILY Protein kinase-like (PK-like) 379 669 IPR011009 -
Trre7g02208 716 ProSitePatterns Serine/Threonine protein kinases active-site signature. 519 531 IPR008271 GO:0004672|GO:0006468
Trre7g02208 716 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 363 473 - -
Trre7g02208 716 Gene3D Transferase(Phosphotransferase) domain 1 474 682 - -
Trre7g02208 716 ProSiteProfiles Protein kinase domain profile. 399 684 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g02208 716 PIRSF SRK 301 716 IPR024171 GO:0004674
Trre7g02208 716 PIRSF SRK 1 309 IPR024171 GO:0004674
Trre7g02208 716 ProSiteProfiles Bulb-type lectin domain profile. 24 146 IPR001480 -
Trre7g02208 716 SMART blect_4 30 152 IPR001480 -
Trre7g02208 716 ProSitePatterns Protein kinases ATP-binding region signature. 405 427 IPR017441 GO:0005524
Trre7g02208 716 SMART serkin_6 399 669 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g02208 716 Pfam D-mannose binding lectin 73 178 IPR001480 -
Trre7g02208 716 Gene3D - 19 149 IPR036426 -
Trre7g02208 716 CDD B_lectin 30 152 IPR001480 -
Trre7g02208 716 Pfam Domain of unknown function (DUF3403) 671 716 IPR021820 GO:0004674
Trre7g02208 716 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 183 IPR036426 -
Trre7g02208 716 Gene3D Phosphorylase Kinase; domain 1 361 473 - -
Trre7g02208 716 CDD STKc_IRAK 405 669 - -
Trre7g02208 716 Pfam Protein tyrosine and serine/threonine kinase 401 666 IPR001245 GO:0004672|GO:0006468
Trre7g02208 716 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 22 716 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02208 Trre-Chr7 17591189 17594370 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g02208 345 684 Receptor kinase-like Gene Family AT4G23230 55.132 1.31e-124 383
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre7g02208 PK_Tyr_Ser-Thr 1.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02208 - - csin:114311600 571.622