Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02207 ATGATTGCTTACAAAATTGCACCTACTATAGCAACGAGTTCCATTAGTGTGTCTGAGATTTTAAGAGATGGAGAAACCTTAGTTTCAAAAGGTGGACAGTTTGAACTGGGTTTCTTCAGCCCGGGTAGTTCTACAAGACGTTACCTTGGGATTTGGTACAAGCAGATGCCTATACAGAAAGTTGTTTGGGTTGCAAATAGAGCTAACCCCATCAACAATACCTTAGGCATGTTAACACTGAGCACCACAGGCGATCTCACACTCCGCCAAAATGACTTTATTGTTTGGACCACAACATCAGAGAAACAAGCACAAAAACCAATAGCAGAGCTCTTGGACACTGGCAATCTTGTGATAAGAAACCAAGAAGAAAAATACCCAGAACAAGGAATCTATTTGTGGCAAAGCTTCAATTATCCATGTGATACAATATTGCCAGGGATGAAGTTAGGATGGGATCTTAGAAATGGTTTGGAACGGAGAATCACTTCTTGGAAGAGTCCTGATGATCCATCTCCAGGTGATCTTTCTTGGGGTCTTGTTCTTCATAACTATCCAGAATTTTATCTGATGGAAGGAACACATAAATCTTGTCGGATTGGACCATGGAATGGACTTCAATTTAGTGGCTTGTCCGATAGAAAACAAAATCCTGTATATGATTTCAAGTATGTTGCTAATAATGATTTGAATTATGCGTCTAATAAGGATGAGATGTTTTACTCCTTTACCCTCAAGAATTCCTCTGCCTTCGTCAGTGCTACGCTATACCAAAACAATTTTTCTATCTCTGTGTGGAAAGAGGATAATACAAATTGGTTGCTTACTGAAACTACCCCGGCAAACTCCTGTGAAATGTATGGGTTATGTGGACCTTATGCAAGCTGCTCAACTAATGCAACTACTGCAAATTTAATAGATTGCAAATGTTTACATGGGTTCATTCCAAAGGCAACGCAAGGATGGGCCACAAACGACTGGAGTGAAGGGTGTGTCCGTAATATATCATTAAATTGCAACAACCCACAAGTGGATGTGGATGATCTGTTGCAAAAATATACGGGCCTCAAAGTACCAGATACTACACATACTGTGTTGTATGAGAATATTGATTTAGAGTTATGCAGAACCATGTGCTTGAATAATTGTTCTTGTACAGCTATCACTAATTCAGACATAAGTGGAAAGGGTAGTGGCTGTGTCATGTGGTTTGGTGATCTAATCGACATAAGACAGTTCGACACTGGTGGCCAAGATCTCTATATCCGTATAGGTCGGGGAATAAAGGCTTCAAACGGGCGCAACAAAAGCATGATGACCATAGCTACTACCACCGCTGCTGCATTGTCCGGGATGCTTTTATTTTGCATTTATGTCATATATAGAGTCCGAAGGAGAAATTATGATAAGTCAAAGGCCGACAATAACGTTGTAAAAGATCTAGAAGATCTAGATTTACCTTTGTTTGATCTGCAAACAATTACTAGTGCCACTAAGAACTTCTCGTTGAATAATAAGATTGGACAAGGTGGTTTTGGATCTGTATACAAGGGAAAGTTAGCGGATGGGCAAGATATTGCTGTTAAGAGACTTTCCACTAACTCTGGACAAGGAATTACCGAGTTCCTAACAGAAGTAAAACTGATTGCAAAACTTCAACACCGAAATCTGGTTAAGCTTCTTGGCTGTTGTGTTGGACGACAAGAAAAATTGCTAGTGTATGAATACATGGCTAACGGTAGCCTTGACTCCTTTATCTTTGATAAAGTAAATGGTAAATTGTTGGACTGGCCCCAACGCTTCCAAATAATATTTGGAATTGCTAGGGGACTTGTGTATCTTCATCAAGATTCTCGATTAAGGATTATTCATAGAGATCTCAAAGCAAGTAATGTATTGTTGGATGACAAGTTGAAGCCAAAAATATCAGATTTTGGAATGGCTAGATCTTTCGGAGGAGATCAAATTGAAGGAGATACAAATAGAGTAGTTGGAACATATGGATACATGGCACCAGAGTATGCGGTTGATGGGAAATTTTCAATCAAATCAGACGTTTTCAGCTTTGGTGTTTTACTATTGGAGATTATATGTGGGAACAAAAATAGAGCACTTTGTCATGGAAACGAGACACTTAACCTTGTTGGTTATGCATGGACACTTTGGAAAGAAGGAAAATCATTAGAGTTGATTGAGTTAGGAATAAAGGATTCATGTATTGTCTCAGAGGTACTGCGATGCATTCATGTGAGTTTGTTGTGTGTTCAACAATACCCAGAGGATAGGCCTACAATGCCATCTATAGTTCTAATGCTAGGTAGTGAAATGGAATTGGTTGAGCCTAAAGAACCAGGTTTCTTTCCGAGGAAAATTTCTAATGAAGGAAAACTATGTTCATCAAATCAGAATGAAATTAGTTCAAATGAGGAATTAACCATTACTTCGCTGAATGGTCGATGA 2460 0.3898 MIAYKIAPTIATSSISVSEILRDGETLVSKGGQFELGFFSPGSSTRRYLGIWYKQMPIQKVVWVANRANPINNTLGMLTLSTTGDLTLRQNDFIVWTTTSEKQAQKPIAELLDTGNLVIRNQEEKYPEQGIYLWQSFNYPCDTILPGMKLGWDLRNGLERRITSWKSPDDPSPGDLSWGLVLHNYPEFYLMEGTHKSCRIGPWNGLQFSGLSDRKQNPVYDFKYVANNDLNYASNKDEMFYSFTLKNSSAFVSATLYQNNFSISVWKEDNTNWLLTETTPANSCEMYGLCGPYASCSTNATTANLIDCKCLHGFIPKATQGWATNDWSEGCVRNISLNCNNPQVDVDDLLQKYTGLKVPDTTHTVLYENIDLELCRTMCLNNCSCTAITNSDISGKGSGCVMWFGDLIDIRQFDTGGQDLYIRIGRGIKASNGRNKSMMTIATTTAAALSGMLLFCIYVIYRVRRRNYDKSKADNNVVKDLEDLDLPLFDLQTITSATKNFSLNNKIGQGGFGSVYKGKLADGQDIAVKRLSTNSGQGITEFLTEVKLIAKLQHRNLVKLLGCCVGRQEKLLVYEYMANGSLDSFIFDKVNGKLLDWPQRFQIIFGIARGLVYLHQDSRLRIIHRDLKASNVLLDDKLKPKISDFGMARSFGGDQIEGDTNRVVGTYGYMAPEYAVDGKFSIKSDVFSFGVLLLEIICGNKNRALCHGNETLNLVGYAWTLWKEGKSLELIELGIKDSCIVSEVLRCIHVSLLCVQQYPEDRPTMPSIVLMLGSEMELVEPKEPGFFPRKISNEGKLCSSNQNEISSNEELTITSLNGR 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02207 819 Gene3D Phosphorylase Kinase; domain 1 462 576 - -
Trre7g02207 819 PIRSF SRK 1 819 IPR024171 GO:0004674
Trre7g02207 819 Gene3D Transferase(Phosphotransferase) domain 1 577 782 - -
Trre7g02207 819 ProSitePatterns Protein kinases ATP-binding region signature. 507 529 IPR017441 GO:0005524
Trre7g02207 819 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 577 780 - -
Trre7g02207 819 ProSiteProfiles Protein kinase domain profile. 501 779 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g02207 819 ProSiteProfiles Bulb-type lectin domain profile. 12 132 IPR001480 -
Trre7g02207 819 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 13 763 - -
Trre7g02207 819 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 464 576 - -
Trre7g02207 819 Pfam Protein tyrosine and serine/threonine kinase 502 770 IPR001245 GO:0004672|GO:0006468
Trre7g02207 819 ProSitePatterns Serine/Threonine protein kinases active-site signature. 622 634 IPR008271 GO:0004672|GO:0006468
Trre7g02207 819 SMART ntp_6 345 424 IPR003609 -
Trre7g02207 819 Pfam D-mannose binding lectin 61 166 IPR001480 -
Trre7g02207 819 SMART blect_4 18 140 IPR001480 -
Trre7g02207 819 Gene3D - 8 138 IPR036426 -
Trre7g02207 819 SMART serkin_6 501 779 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g02207 819 SUPERFAMILY alpha-D-mannose-specific plant lectins 61 171 IPR036426 -
Trre7g02207 819 CDD STKc_IRAK 507 772 - -
Trre7g02207 819 Pfam PAN-like domain 347 410 IPR003609 -
Trre7g02207 819 Pfam S-locus glycoprotein domain 199 317 IPR000858 GO:0048544
Trre7g02207 819 SUPERFAMILY Protein kinase-like (PK-like) 486 789 IPR011009 -
Trre7g02207 819 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 8 137 - -
Trre7g02207 819 ProSiteProfiles PAN/Apple domain profile. 339 425 IPR003609 -
Trre7g02207 819 CDD B_lectin 18 140 IPR001480 -
Trre7g02207 819 CDD PAN_AP_plant 337 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02207 Trre-Chr7 17582622 17587471 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g02207 439 795 Receptor kinase-like Gene Family AT4G23190 51.093 2.05e-123 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre7g02207 PK_Tyr_Ser-Thr 5.4e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02207 - - gmx:100812007 1118.22