Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02206 ATGAAAATTGTTTCTTTCATTATTATTATTATTATGATGATTGCTTACAAAATTGCACCCACTATAGCAACAAGTTACATCAGTGTGTCTCAGTTTTTAAGTGATGAAAAAACCATAGTTTCAAAAGGTGGACAGTTTGAACTGGGTTTCTTCAGCCCCGGCAATTCTACTAGACGTTACCTTGGGATTTGGTATAAGCAGATGCCTATAAAGAAAGTTGTTTGGGTTGCAAATAGGGCCAACCCCGTCAACAATACCTTAGGCATCTTAACACTGAGCACCACAGGTAATCTCATACTCCGCCAAAATGAATCTGTTGTTTGGAGCACAACATCAGAGAAACAATCACAAAAACCAATAGCGGAGCTCTTGGACAGTGGCAATCTTGTGATAAGAAGCCAAGGAGAAACAGACCCAGAAGAAGGAACATATTTGTGGCAAAGCTTTGACTATCCCTGTGATACAATATTGCCAGGGATGAAGTTAGGATGGGATCTTAGAAATGGTTTGGAACGGAGAATCACTTCTTGGAAAAGTCCTGATGATCCATCTCCAGGTGATCTTTCTTGGGGTCTTGTGCTTCATAATTATCCAGAGTTTTATTTGATGAATGGAACAGAGAAATACAGTCGAATTGGACCATGGAATGGACTTCAATTTAGTGGCTTGTGGAATGGAAAACAAAATCCTATATATGATTTCAAGTATGTTGCTAATCATGATTTGAATTATGTGTCTAATAAGAATGAGATGTTTTACTCCTTTACCCTAAAGAATCGTTCTGCAATTGTTACTATTGAGATAAACCATAACATGTTTGTCACCTATTTGTGGAGAGATACAGCGTGGCTGTTATTTCAAGCAACCCCGAGTGACCAGTGTGACATTTATGGGGTTTGTGGACCCTATGCCAATTGCTCAATTATCCATTCACCAATCTGCCAATGTTTACCTGGGTTCATTCCAAAGTCAACCCGACAACGGGCCAACAAAAAATGGAGTCAAGGGTGTGTCCGTAATATATCATTAAGTTGCAACAACCCACAAGTGGATGTGGAAGATATATTTCTCAAGTTTACAGGCCTTAAAGTACCAGATACTACATATACTTTGTTGTACGAGAATATTGATTTAGAGTTATGCCGAACCATGTGCCTCAATAATTGCTCTTGTACAGCTTACACTAATTCAGACATAAGTGGAAAGGGTAGTGGCTGTGTCATGTGGTTTGGTGAACTAGTTGACATAAGACATTTTGACACCAGTGATGGCCAAGATCTCTATATCCGTATAGCTCAGGATGTAATAGAGGCGTCAAACAGGCACAAGAAAAGTGTGATAACAATAGCTGCTATCACTACTGCTGCAATTTCTGGGATGCTTTTATTTTGCATATATGTCATTTATAGAGTTCGAAGGAGAATTGCTGATAAGTCAAAAACAGAAAATAACATTGAAAAGCATCTAGAGGATATGGATTTACCGTTATTCGATCTGCAAACAATTGCTGGTGCCACTAGCAACTTCTCGTTGAACAATAAAATTGGACAAGGTGGTTTTGGATCTGTATACAAGGAAAAACTAGCAGATGGGCAAGAAATTGCTGTTAAGAGACTTTCAACTAACTCTGGACAAGGAATTACTGAGTTCCTAACAGAAGTAAAACTGATTGAAAAACTTCAACACCGAAATCTTGTTAAGCTTCTGGGCTGTTGTGTTGGACGACAAGAAAAATTGCTAGTATATGAATACATGGCTAACGGTAGCCTTGACTCCTTTATCTTTGATAAAGTAAATGGTAAATTGTTGGACTGGCCCAAACGCTTCCAAATAATATTTGGAATTGCTAGGGGACTTGTGTATCTTCATCAAGATTCTCGATTAAGGATTATTCATAGAGATCTCAAAGCAAGTAATGTATTGTTGGATGACAAGTTGAACCCAAAAATATCAGACTTTGGAATGGCTAGATCATTTGGAGGAGATCAGATTGAAGGAAATACAAATAGAGTAGTTGGAACATATGGATACATGGCACCAGAGTATGCGGTCGATGGGAAATTTTCAATCAAATCAGATGTTTTCAGCTTTGGTGTTTTACTGTTGGAGATTATATGTGGGAACAAAAATAGAGCACTTTGTCATGGAAACGAGACACTTAATCTTGTTGGTTATGCATGGACACTTTGGAAAGAAGGAAAATCATTAGAGTTGATTGAGTTAAGAATAAAGGATTCATGTGATGTCTCAGAGGTACTGCGATGCATTCATGTGAGTTTGTTGTGTGTTCAACAATACCCAGAGGATAGGCCTACAATGTCATCTATAGTTCTAATGCTAGGTAGTGAAATGGAATTGGTTGAGCCTAAAGAACCAGGTTTCTTTCCAAGGAAAGCTTCTTCAGATGAAGGAAATCTATGTTCATCAAATCAAAATGAAATTAGTTCAAATGAGGAACTAACCATTACTTCACTAAATGGTCGATGA 2487 0.3796 MKIVSFIIIIIMMIAYKIAPTIATSYISVSQFLSDEKTIVSKGGQFELGFFSPGNSTRRYLGIWYKQMPIKKVVWVANRANPVNNTLGILTLSTTGNLILRQNESVVWSTTSEKQSQKPIAELLDSGNLVIRSQGETDPEEGTYLWQSFDYPCDTILPGMKLGWDLRNGLERRITSWKSPDDPSPGDLSWGLVLHNYPEFYLMNGTEKYSRIGPWNGLQFSGLWNGKQNPIYDFKYVANHDLNYVSNKNEMFYSFTLKNRSAIVTIEINHNMFVTYLWRDTAWLLFQATPSDQCDIYGVCGPYANCSIIHSPICQCLPGFIPKSTRQRANKKWSQGCVRNISLSCNNPQVDVEDIFLKFTGLKVPDTTYTLLYENIDLELCRTMCLNNCSCTAYTNSDISGKGSGCVMWFGELVDIRHFDTSDGQDLYIRIAQDVIEASNRHKKSVITIAAITTAAISGMLLFCIYVIYRVRRRIADKSKTENNIEKHLEDMDLPLFDLQTIAGATSNFSLNNKIGQGGFGSVYKEKLADGQEIAVKRLSTNSGQGITEFLTEVKLIEKLQHRNLVKLLGCCVGRQEKLLVYEYMANGSLDSFIFDKVNGKLLDWPKRFQIIFGIARGLVYLHQDSRLRIIHRDLKASNVLLDDKLNPKISDFGMARSFGGDQIEGNTNRVVGTYGYMAPEYAVDGKFSIKSDVFSFGVLLLEIICGNKNRALCHGNETLNLVGYAWTLWKEGKSLELIELRIKDSCDVSEVLRCIHVSLLCVQQYPEDRPTMSSIVLMLGSEMELVEPKEPGFFPRKASSDEGNLCSSNQNEISSNEELTITSLNGR 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02206 828 ProSiteProfiles Bulb-type lectin domain profile. 24 144 IPR001480 -
Trre7g02206 828 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 585 788 - -
Trre7g02206 828 Gene3D Transferase(Phosphotransferase) domain 1 585 790 - -
Trre7g02206 828 FunFam receptor-like serine/threonine-protein kinase SD1-8 480 584 - -
Trre7g02206 828 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 20 149 - -
Trre7g02206 828 SMART blect_4 30 152 IPR001480 -
Trre7g02206 828 PIRSF SRK 1 828 IPR024171 GO:0004674
Trre7g02206 828 CDD STKc_IRAK 515 780 - -
Trre7g02206 828 Pfam S-locus glycoprotein domain 211 324 IPR000858 GO:0048544
Trre7g02206 828 SMART ntp_6 351 431 IPR003609 -
Trre7g02206 828 Pfam Protein tyrosine and serine/threonine kinase 510 778 IPR001245 GO:0004672|GO:0006468
Trre7g02206 828 MobiDBLite consensus disorder prediction 802 828 - -
Trre7g02206 828 ProSiteProfiles PAN/Apple domain profile. 345 432 IPR003609 -
Trre7g02206 828 Pfam PAN-like domain 351 416 IPR003609 -
Trre7g02206 828 Gene3D Phosphorylase Kinase; domain 1 469 584 - -
Trre7g02206 828 Gene3D - 21 149 IPR036426 -
Trre7g02206 828 CDD PAN_AP_plant 343 432 - -
Trre7g02206 828 ProSiteProfiles Protein kinase domain profile. 509 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g02206 828 SMART serkin_6 509 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g02206 828 CDD B_lectin 30 152 IPR001480 -
Trre7g02206 828 SUPERFAMILY Protein kinase-like (PK-like) 494 790 IPR011009 -
Trre7g02206 828 ProSitePatterns Serine/Threonine protein kinases active-site signature. 630 642 IPR008271 GO:0004672|GO:0006468
Trre7g02206 828 MobiDBLite consensus disorder prediction 797 828 - -
Trre7g02206 828 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 183 IPR036426 -
Trre7g02206 828 Pfam D-mannose binding lectin 73 178 IPR001480 -
Trre7g02206 828 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 13 771 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02206 Trre-Chr7 17571884 17576547 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g02206 445 797 Receptor kinase-like Gene Family AT4G23190 52.368 1.31e-123 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre7g02206 PK_Tyr_Ser-Thr 2.3e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02206 - - gmx:100812007 1142.1