Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02192 ATGCCAACAGTGTGGTTTTCTTTGAAGAAGTCACTACATTGCAAATCAGAACCATCAGATGTACATGATCCACAAACAAGGAAACATTTGAGTACAATTTTAACAAAAAGAGGAGGAGGAAGATCAGGTTGTTCAAGATCAATAGCAAATCTAAAAGATGTTATTCATGGTAGTAAAAGACATATTGAAAAGCCACCAAGTTGTAGTCCAAGATCTATAGGTAGTAGTGAGTTTCTTAACCCAATAACTCATGAAGTTATTTTGAGTAACTCAAGGTGTGAGTTAAAAATCACTGGTTTTCAAGAAGGTGTTGGAAATGGTGGTAACAATGCTAGTGGTAGTAGTAGTGCTGGTTCTTCAACTTTTGTTGGTACTTTAAGACCTGGTACACCTGGTCCTGGAGGACACCCTACAATGCATTACTTTAATCCTTCTTTTAGGACTTCTTCAACTCCTCCAAGAAAATCACCTTTTCTTTTGTCAGAAGGTTCTGGTTTTCATGGTTCTGCTGGTGCTGCTGGTGGTGGTGGTGGTGTTCATTCAAGTAATAGAATGTCCCTTGAGACAGATTCTAATGGTTCTTCAACTGTTACTTGTCACAAATGTGGTGAACAGTTTAACAAATGGGAAGCTGCTGAAGCTCATCATCTCTCCAAGCATGCTGTTACTGAACTTGTGGAAGGAGATTCATCAAGGAAAATAGTGGAGATAATATGCAGGACAAGTTGGTTAAAGTCAGAAAACAACTGTGGTAGAATTGAAAGAGTTTTGAAGGTACACAACATGCAAAAAACTTTAGCTAGATTTGAAGAATATAGGGAAATGGTGAAAATCAAAGCAAGTAAACTCCAGAAGAAGCATCCTAGGTGTTTAGCTGATGGAAATGAACTTTTAAGGTTCTATGGAACCACTGTTGCTTGTTCTCTTGGTCTCAATGGTTCTTCAAGTTTATGCCTATCAGAAAAATGTTGTGTTTGTAGAATTATTAGAAGTGGTTTTTCTGCTAAGAAGGAACTTAAAGGTGGCATAGGTGTTTTCACAACATCTACAAGTGGAAGAGCTTTTGAATCAATAGAGATTTTAGATAATGAACCATCATTAAGAAAAGCATTGATAGTATGCAGAGTAATTGCTGGTAGGGTTCATAGGCCACTTGAGAACATTCAAGAAATGGCAGCACAAACTGGATTTGATTCATTGGCTGGAAAAGTAGGTCTTTATTCAAATATTGAGGAACTTTATTTGCTTAATCCTAGAGCTCTTCTTCCTTGTTTTGTGGTAATTTGCAAACCATGA 1296 0.3719 MPTVWFSLKKSLHCKSEPSDVHDPQTRKHLSTILTKRGGGRSGCSRSIANLKDVIHGSKRHIEKPPSCSPRSIGSSEFLNPITHEVILSNSRCELKITGFQEGVGNGGNNASGSSSAGSSTFVGTLRPGTPGPGGHPTMHYFNPSFRTSSTPPRKSPFLLSEGSGFHGSAGAAGGGGGVHSSNRMSLETDSNGSSTVTCHKCGEQFNKWEAAEAHHLSKHAVTELVEGDSSRKIVEIICRTSWLKSENNCGRIERVLKVHNMQKTLARFEEYREMVKIKASKLQKKHPRCLADGNELLRFYGTTVACSLGLNGSSSLCLSEKCCVCRIIRSGFSAKKELKGGIGVFTTSTSGRAFESIEILDNEPSLRKALIVCRVIAGRVHRPLENIQEMAAQTGFDSLAGKVGLYSNIEELYLLNPRALLPCFVVICKP 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02192 431 MobiDBLite consensus disorder prediction 105 126 - -
Trre7g02192 431 Gene3D - 212 430 - -
Trre7g02192 431 MobiDBLite consensus disorder prediction 105 135 - -
Trre7g02192 431 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 4 429 - -
Trre7g02192 431 FunFam C2H2-like zinc finger protein 221 430 - -
Trre7g02192 431 ProSitePatterns Zinc finger C2H2 type domain signature. 199 220 IPR013087 -
Trre7g02192 431 SUPERFAMILY ADP-ribosylation 222 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02192 Trre-Chr7 17424818 17426589 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g02192 1 431 C2H2 Transcription Factor Family AT5G54630 68.670 0.0 587
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Trre7g02192 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02192 - - gmx:100787790 728.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g02192 7 17424818 17426589 Trre7g02192 7 17424818 17426589 ECH