Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02184 ATGTCGGACCATATGGAAAAGAATGTTGAAGCCATCGTTTTGAAGAATAGAGGAGGAGGAGAGATGGTGATGGATGCAGTGATGATTGAATACTTTTCAAATCTTAAATTGCTCATCATCCGCCAACAAAATATGGAATATGTGAATTCATCTGAAAGCCTCAGTTGTCTTTCTAACGAATTAAGATATGTTCATTGGTCAGAATATCCTTTCATGTATTTGCCATCAAGTTTTCAGCCCAATCAACTTGTTGAGTTGATATTGTTTGGTAGTAGCATCGAACAACTATGGAAAGGCAAAAAGTATCTGCCCAATTTGAGACATTTGTGTCTACGCTATTCCAAAAATCTAATAGAGATACCAAATTTTGAAGAGTTCCCGAATCTTGAGAAGTTAAATCTGGAAGGATGTGAAAGGCTTGTGAAGTTGGATCCTTCTATTGGACTTCTAAGTAAGCTTGTTTACTTGAATTTGGCAGCATGTTCAAAACTTGTGAAGTTGGATCCTTCTATTGGACTTTTAAGAACAATTGTTTACTTGAATTTGGGAGGGTGCTCAAGTCTAATAAGCATACCCAACACCATATTTGGTCACAGCTCTCTTAAATACATAAACATGAGTTGGTGTTCCAAAGTGTCGTTTAACAACAATCCCGGGCATATGAATATAATTAAAAGGGCATCACAGTTAACTTCTCCATCTTCAAATGTACCACCACACCGCTTTATCATTCCTTATTTCCCACTCCCAGGGAAGGCAAAATGGTTGTATTGTTTGAGTGCAATTGATATCAGTTATTGTGGTCTACGCCAACTCCCTCGTGCAATTGGATGCCTAAGTCAGCTACAAAGTTTAAATCTTGAGGGAAACAGTTTTGTATCACTACCCAGCCTGAATGAGCTTTTCAAACTTGTTTATTTAAACTTGAATAATTGCAAGTTTTTGGAATATTTGCCTCAACTTCCTTTTCCTACTGCTGCCAATAGGGATCTTCCCATTGATAAAATAGGATTGCACATGCTCAGATGTCCTAAATTGGGTGAGAGGGAACTTAGAATTGCATTTTCTTGGATGACACAATTGATTCAAGCAAACCCACAATTCTCTGGATTTATTGAGATTATTGTTTCTGGAAGTGAAATACCAAGTTGGTTTATGAATCAAAGTGTGGGTGGTAGAATACTTTTTGAACAAAGCGTGGGTGGTAGAATACGGGTAGACAACTCTCCCATTAAACATGACATTAACAATGATATCATTGGCCTTCTATGTTGTTTACTACAAAATTCCATTCGGATAACCTATGCCCCCCGCCGGAAGTGGTCCCAGTATGTTCAGGGCTTTAAGCGTGGAAAATGTGATCTTCAATTCATGCATCCTCCTTGGGTGGATAACCGTGTGAAGAGTTGCGGATATGGCTGGGTACATAAACAGGATCTACAAAAGTTTAACTTCATGTATCCTGGAAACTCGTCAGCTCTGAAGCACAAGTTTTTGGCAATAGAAGACATTCATTCATCTGATTAA 1527 0.3824 MSDHMEKNVEAIVLKNRGGGEMVMDAVMIEYFSNLKLLIIRQQNMEYVNSSESLSCLSNELRYVHWSEYPFMYLPSSFQPNQLVELILFGSSIEQLWKGKKYLPNLRHLCLRYSKNLIEIPNFEEFPNLEKLNLEGCERLVKLDPSIGLLSKLVYLNLAACSKLVKLDPSIGLLRTIVYLNLGGCSSLISIPNTIFGHSSLKYINMSWCSKVSFNNNPGHMNIIKRASQLTSPSSNVPPHRFIIPYFPLPGKAKWLYCLSAIDISYCGLRQLPRAIGCLSQLQSLNLEGNSFVSLPSLNELFKLVYLNLNNCKFLEYLPQLPFPTAANRDLPIDKIGLHMLRCPKLGERELRIAFSWMTQLIQANPQFSGFIEIIVSGSEIPSWFMNQSVGGRILFEQSVGGRIRVDNSPIKHDINNDIIGLLCCLLQNSIRITYAPRRKWSQYVQGFKRGKCDLQFMHPPWVDNRVKSCGYGWVHKQDLQKFNFMYPGNSSALKHKFLAIEDIHSSD 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02184 508 SUPERFAMILY L domain-like 30 321 - -
Trre7g02184 508 Gene3D Ribonuclease Inhibitor 5 232 IPR032675 -
Trre7g02184 508 Gene3D Ribonuclease Inhibitor 244 348 IPR032675 -
Trre7g02184 508 ProSiteProfiles Leucine-rich repeat profile. 281 302 IPR001611 GO:0005515
Trre7g02184 508 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 28 334 IPR044974 GO:0006952
Trre7g02184 508 Pfam Leucine Rich repeats (2 copies) 104 145 IPR025875 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02184 Trre-Chr7 17352328 17356118 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g02184 28 285 WRKY Transcription Factor Family AT4G12020 32.753 1.79e-25 109