Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02181 ATGGCAAGCAGCAGCAACTCCTTCCCTGCCTCAGCTCTGGTGACATTGCCAAAGAAAAGAAACAATTATGATGTGTTTGTCACCTTCAGAGGTGAAGACACTCGCAATAATTTCACTGATTTTCTTTTTAATGCCCTCGAAGATAAAGGCGTTTCTGTATTTAGGGATGACACTCATCTTCCAAAAGGTGATACCATTGGACCTGAACTCCTTTGTGCAATCGAAGCCTCTCAGGTTTTCGTCGTCATCTTCTCAAAGAACTATGCTTCCTCAACGTGGTGCTTGCAAGAATTGGAAAAGATATGTGAATGTGTTCAAGTGTCTGGAAAACATGTTTTGCCTGTTTTCTATGATGTTGATCCTTCTGAGGTGCGAAAGCAAAGTGGGATTTATGGTGAAGCCTTTGTCAAACATGAACAAAGATTCCAACAAGACAGTGAGATATCGATGGTGCAAAGATGGAGGAAAGCTCTCACACAAGTGGGATCAAAATCTGGTTGGGATGTGCGTAATAAGTCACAATCTGCACAGATTAAAGAGATTGTTCAAAGAATAATATATATTTTGGATTGCAAACCTTCACGTGCTTCAAAAGATTTAGTTGGGATAGATTCTCCTATACAAGAATTACAGAGTCATATATTCTTGAACTCTGTTGATGATGTTCGGGCTATAGGAATTTGTGGAATGGGAGGAATAGGGAAGACAACCCTTGCCACTGCTTTGTATGCTCGAGTCTCTAATCAATTTGATGCATGCTGTTTTATTGATGATGTCAACAAAGTTTTTAGATCACATGATGGTCCACTTGGTGTACAAAAACAAATTCTACATAAAACACTCGGCAAAGAACACAATCAGATATGCAGTAGTCCTGATGCAATTTATCTGATGCAAAATAGACTAGGTCGTGTAAGGACCCTTCTTATTCTTGATAATGTTGATCATGTTAAGCAACTAGGAATAATACCTCTGAATCGTGAATGGTTAGGTGCAGGTAGTAGAATCATTATCATTTCTAGAGATGAACATATTTTGATAAAGTATGGAGTGGATGTTGTTTACCAAGTTCCACTCTTGAATGAGACTAACTCTCTAGAATTATTTTGCCGACAAGCTTTCAAACTTGATCATATTTTGAATAGTTATGAAGGGCTGGTTAGTAGCATATTGCATTATACTGATGGCCTACCACTTGCAATTGAAGTATTGGGCTCATTTTTATATGGTCGAAATATCTCTGAATGGAGAAGTGCATTATCTAGATTGAGAGAAAGTTCAGACAAAGATGTCATGGATGTGCTACAAATTAGTTTTGATGGACTAGACATGGCGGAAAAAGAAATATTTCTTCACATTGCTTGTCTTTTTAACTCCGATGACGCGGATGGTGTTAAAAATGTTCTAAATTGTTGTGGATTTCATGCTGATATTGGATTGAGAATTCTTATTGATAAATCACTTTTAAGAATTGAGATTGGTCAGATTAGAATGCATAATTTATTGCAAGAGCTAGGCAGAAAAATTGTCCAAGAAAATTCAAGCAAAGGGTCAAAAAAGTGGAAAAGATTGTGGCTTAAGGAACAATTCAACGATGTTATGTCAGACCATATGGAAAAGAATGTTGAAGCCATAGTTTTGAAAGATGAAAAGGAGTTAATTATCATGGATGCAGTGATGCTTGAAAGCTTTTCAAATCTTAAATTGCTCATCATTTGTGAGATGAGTGAATACATGAATGAATCAGGAAGCCCCAATTGTCTTTCTAACAAATTAAGATATGTTGAATGGTCGCATTATCCATTCATGTATTTGCCATCAAATTTTCAGCCCATTCAACTTGTTGAGTTGATATTGGTGAATAGTAGCATCAAACAACTATGGAAAGGGAAAAAGTATCTCCCCAATTTGAGACATTTGTGTCTACGCGATTGCCATGATCTAATAGAGATACCAAATTTTGAAGAGTTCCCAAATCTTGAGTACTTAGATCTGAAAGGATGTGAAAAACTTGTGAAGTTGGATCCTTCAATTGGACTTCTAAGAAAGATTGTTTACTTGAATTTGAAAGATTGCTTCAGTCTAATAAGCATACCCACCAACACCATATTTGGGATCACCTCTCTTAAATACATAAACATGAGTGGCTGTTCTCAATCTTCAATAGCACCACTCCGCTTAGTCATTGATTTTTCCCCACTCCTGAAGTACGTAGAATGGTTATATTGTATGAGTGAAGTTGATATTAGTTTTTGTGGTCTAAGCCAACTCCCTGAGGCAATTGGATGCCTACTTCAGCTACAAAGTTTAAATCTTGGTGGAAACTATTTTGTGTCACTACCCAGCCTGAATGAGCTTTCCAAACTTGTATATTTAAACTTGGATCATTGCGTGTTTTTGGAATCTTTGCCACAACTTCCTTTTCCTACTTCTATCAATTTGGATCTTGGTACTGAGCATTTTCCTGACAAAATAGGATTGCACATATTCAACTGTCCTAAATTGGGTGAGAGGGAATGTAGAATTGCATTTTCATGGTTCAAACAATTCATTCAAGCAAACCCACAATTCCCTCGTGTGATTGATATTGTTATTCCTGGAAGTGAAATACCAAGTTGGTTCAACAATCAAAGCGAGGGTGATAAAATACTGATAGACTACTCTCCCATTAAGCATGACATTAACAATCATATCGTTGGCCTTGTATGCTGTTCAGTATTTTCTGTGGAACCTATTGATCTAATAGATACACAATTGTTGTACAAGTGGGCATTTAAGATTGTGATTAAATTTCATTTAACTGGTTTATGCTTAGATAGTATAGTGACCATGCTAGATCATCAAAATTTTATTCCATTTTACGATGGAGGTCTTATTAAGGTCAAAACAAATCACATTTGTCTAACCTATTTCCCCCGGAATTTGTCCTGGTATGTTCCGGACTTTCATGGCTCAATGGATGTTAAATTTGGTGACAGTATTTATAATTGCTGTATACATACGGAAGTGAGGAATTGTGGATATGGCTGGCTACATAAACAGGATCTAAAAGAGTTCAACTTAACAACAGTGCATCCTGGAAACTCGTCAGCTCTGAAGCACAAGTTTTTGGCAATAGAAGACATTCATTCATCTGATTAA 3141 0.3671 MASSSNSFPASALVTLPKKRNNYDVFVTFRGEDTRNNFTDFLFNALEDKGVSVFRDDTHLPKGDTIGPELLCAIEASQVFVVIFSKNYASSTWCLQELEKICECVQVSGKHVLPVFYDVDPSEVRKQSGIYGEAFVKHEQRFQQDSEISMVQRWRKALTQVGSKSGWDVRNKSQSAQIKEIVQRIIYILDCKPSRASKDLVGIDSPIQELQSHIFLNSVDDVRAIGICGMGGIGKTTLATALYARVSNQFDACCFIDDVNKVFRSHDGPLGVQKQILHKTLGKEHNQICSSPDAIYLMQNRLGRVRTLLILDNVDHVKQLGIIPLNREWLGAGSRIIIISRDEHILIKYGVDVVYQVPLLNETNSLELFCRQAFKLDHILNSYEGLVSSILHYTDGLPLAIEVLGSFLYGRNISEWRSALSRLRESSDKDVMDVLQISFDGLDMAEKEIFLHIACLFNSDDADGVKNVLNCCGFHADIGLRILIDKSLLRIEIGQIRMHNLLQELGRKIVQENSSKGSKKWKRLWLKEQFNDVMSDHMEKNVEAIVLKDEKELIIMDAVMLESFSNLKLLIICEMSEYMNESGSPNCLSNKLRYVEWSHYPFMYLPSNFQPIQLVELILVNSSIKQLWKGKKYLPNLRHLCLRDCHDLIEIPNFEEFPNLEYLDLKGCEKLVKLDPSIGLLRKIVYLNLKDCFSLISIPTNTIFGITSLKYINMSGCSQSSIAPLRLVIDFSPLLKYVEWLYCMSEVDISFCGLSQLPEAIGCLLQLQSLNLGGNYFVSLPSLNELSKLVYLNLDHCVFLESLPQLPFPTSINLDLGTEHFPDKIGLHIFNCPKLGERECRIAFSWFKQFIQANPQFPRVIDIVIPGSEIPSWFNNQSEGDKILIDYSPIKHDINNHIVGLVCCSVFSVEPIDLIDTQLLYKWAFKIVIKFHLTGLCLDSIVTMLDHQNFIPFYDGGLIKVKTNHICLTYFPRNLSWYVPDFHGSMDVKFGDSIYNCCIHTEVRNCGYGWLHKQDLKEFNLTTVHPGNSSALKHKFLAIEDIHSSD 1046
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02181 1046 PRINTS Disease resistance protein signature 224 239 - -
Trre7g02181 1046 PRINTS Disease resistance protein signature 655 671 - -
Trre7g02181 1046 PRINTS Disease resistance protein signature 394 408 - -
Trre7g02181 1046 PRINTS Disease resistance protein signature 301 315 - -
Trre7g02181 1046 SUPERFAMILY L domain-like 563 1034 - -
Trre7g02181 1046 FunFam Disease resistance protein (TIR-NBS-LRR class) 19 190 - -
Trre7g02181 1046 SMART till_3 22 164 IPR000157 GO:0007165
Trre7g02181 1046 Pfam C-JID domain 865 1016 IPR045344 -
Trre7g02181 1046 Gene3D - 17 191 IPR035897 -
Trre7g02181 1046 Gene3D - 192 353 IPR027417 -
Trre7g02181 1046 Gene3D Ribonuclease Inhibitor 510 727 IPR032675 -
Trre7g02181 1046 Gene3D Ribonuclease Inhibitor 730 835 IPR032675 -
Trre7g02181 1046 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 23 814 IPR044974 GO:0006952
Trre7g02181 1046 Gene3D - 359 443 IPR042197 -
Trre7g02181 1046 SUPERFAMILY Toll/Interleukin receptor TIR domain 21 167 IPR035897 -
Trre7g02181 1046 SUPERFAMILY "Winged helix" DNA-binding domain 430 533 IPR036390 -
Trre7g02181 1046 ProSiteProfiles Leucine-rich repeat profile. 766 787 IPR001611 GO:0005515
Trre7g02181 1046 ProSiteProfiles TIR domain profile. 21 189 IPR000157 GO:0007165
Trre7g02181 1046 Pfam TIR domain 22 193 IPR000157 GO:0007165
Trre7g02181 1046 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 189 453 IPR027417 -
Trre7g02181 1046 Pfam NB-ARC domain 219 438 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02181 Trre-Chr7 17342740 17346363 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g02181 22 804 WRKY Transcription Factor Family AT4G12020 30.050 1.90e-83 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02181 - - mtr:11446628 1156.74