Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02176 ATGGCTAGCAGCAGCAACTCCTCTTCTTCAGCTCTGGTGACATTGCCAAAGAAGAGAAACAATTATGATGTGTTTGTCACCTTTAGAGTGTCTGGAAAACATGTTTTGCCTGTTTTCTATGATGTTGATCCTTCTGAGGTGCGAAAGCAAAGTGGGATTTATGGTGAAGCCTTTGTCAAACATGAACAAAGATTCCAACAAGACTATGAGATATCGATGGTGCAAAGATGGAGGAAAGCTCTCACACAAGTGGGATCAATCTCTGGATGGGATGTGCGTCATAAGTCACATTCTTCACAGATTAAAGAGATTGTTCAAAGAATACTAGATATTCTGCCTTTCAAATCTTCATGCCAAAAAATTGCCCAAGAAAATTCAAGCAAAGAGTCAAGAAAGTGGAAAAGGTTGTGGTCTCGGGAACAATTGGACGGTGTTATGTCGGACCATATGGAAAAGAATGTTGAAGCCATAGTTTTGAACGATGAAAAGGAGTTAATTATCATGGATGCAGTGATGCTTGAAAACTTTTCAAATCTTAAATTGCTCATCATTATGAGTGAATACAGGTGGGAAACGATGGGAAACGTGAATTCATCTGAAAGCCTCAGTTGTCTTTCTAACGAATTAAGATATGTTGAATGGATGAATTATCCATTCATGTATTTGCCATCAAGTTTTCAGCCCACTCAACTTGTTGAGTTGATATTGATGCATAGTAGCATCGAACAACTATGGAAAGACAAAAAGTATCTGCCTAATTTGAGACATTTGTGTCTACGCCTTTCCTATAATCTAATAGAGATACCAAATTTTGAAGAGTTCCCAAATCTTGAGCGGTTAAATCTGGCAGCATGTTCAAGCCTTGTGAAGTTGGATCCTTCTATTGGACTTCTAAAAAAGATTGTTTACTTGAATTTGAAAGATTGCACAAGTCTAATAAGCATACCAAACACCATATTTGGTCACAGCTCTCTTAAATACATAAACATGAATCACTGTTCGAAACTGTCGTTTAACAACAATCCCGGGCATATGAATATAATTAAAAGGGCATCACATTCTCTGCAGTCAACTTCTCCATCTTCAAATGTACCACCACTCCGCTTTATCATTGCTTCTTTCCCACTCCCGAGGTCGGCAGATTGGTTATATTGTTTGAATGAAATTGATATCAGTTATTGTGGTCTACGCCAACTCCCTGATGCAATTGGATGCCTACGTCAGCTACAAAGTTTAAATCTTGGCGGAAACTATTTTGTGTCACTACCCAGCCTCAATGAGCTTTTCAAACTTGTATATTTAAACTTGGATAATTGCATATTTTTGGAATCTTTGCCTCAACTTCCTTTTCCTACTGCTGTCAATTGGGATCTTCCCATTGAGAAAATAGGATTGCGCACATACAACTGTCGTAAATTGGGTGAGAGGGAACTTAGAATTGCATTTTCTTGGATGACACAATTGATTCAAGCAAACCCACAATTCTCTGGATTGATTGAGATTATTGTTCCTGGAAGTGAAATACCAAGTTGGTTTATGAATCAAAGCGTGGGTGGTAGAATACTTTTTGTACAAAGCATGAGTGGTAGAATACGGGTAGACAACTCTCCCATTAAACATGACATTAACAATGATATCATTGGCCTTCTATGTTGTTCACTACAAAATTCCATTCGGATAACCTATGTCCCCCGGAAGTGGTCCCAGTATGTTCAGGGCTTTATTCGTGGCACATGTGATCTTCAATTCATGTATCCTCCTTGGGTGGATAACCGTGTGAATGGTTGCGGATATGGCTGGGTACATAAACAGGACCTACAAGAGTTTAACTTCATGTATCCTGGAAACTCGTCAGCTCTGAAGCGCAAGTTTTTGGCAATAGAAGACATTCATTCATCTGATTAA 1905 0.3874 MASSSNSSSSALVTLPKKRNNYDVFVTFRVSGKHVLPVFYDVDPSEVRKQSGIYGEAFVKHEQRFQQDYEISMVQRWRKALTQVGSISGWDVRHKSHSSQIKEIVQRILDILPFKSSCQKIAQENSSKESRKWKRLWSREQLDGVMSDHMEKNVEAIVLNDEKELIIMDAVMLENFSNLKLLIIMSEYRWETMGNVNSSESLSCLSNELRYVEWMNYPFMYLPSSFQPTQLVELILMHSSIEQLWKDKKYLPNLRHLCLRLSYNLIEIPNFEEFPNLERLNLAACSSLVKLDPSIGLLKKIVYLNLKDCTSLISIPNTIFGHSSLKYINMNHCSKLSFNNNPGHMNIIKRASHSLQSTSPSSNVPPLRFIIASFPLPRSADWLYCLNEIDISYCGLRQLPDAIGCLRQLQSLNLGGNYFVSLPSLNELFKLVYLNLDNCIFLESLPQLPFPTAVNWDLPIEKIGLRTYNCRKLGERELRIAFSWMTQLIQANPQFSGLIEIIVPGSEIPSWFMNQSVGGRILFVQSMSGRIRVDNSPIKHDINNDIIGLLCCSLQNSIRITYVPRKWSQYVQGFIRGTCDLQFMYPPWVDNRVNGCGYGWVHKQDLQEFNFMYPGNSSALKRKFLAIEDIHSSD 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02176 634 Gene3D Ribonuclease Inhibitor 356 456 IPR032675 -
Trre7g02176 634 Pfam TIR domain 32 132 IPR000157 GO:0007165
Trre7g02176 634 ProSiteProfiles Leucine-rich repeat profile. 408 429 IPR001611 GO:0005515
Trre7g02176 634 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 30 112 IPR044974 GO:0006952
Trre7g02176 634 Gene3D - 27 114 IPR035897 -
Trre7g02176 634 SUPERFAMILY Toll/Interleukin receptor TIR domain 31 90 IPR035897 -
Trre7g02176 634 SUPERFAMILY L domain-like 173 450 - -
Trre7g02176 634 Gene3D Ribonuclease Inhibitor 115 355 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02176 Trre-Chr7 17308524 17319949 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g02176 108 416 WRKY Transcription Factor Family AT4G12020 31.056 2.36e-23 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02176 - - mtr:11446628 392.889