Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02170 ATGGCTAGCAGCAGCAACTCCTCTGCCTTAGCTCTGGTGACATTGCCAAAGAAGAGAAACAATTATGATGTGTTTGTCACCTTCAGAGGAACAATCTCTGGTTGGGATGTGCGTGATAAGCCACAATCGGCACATATTAAAGAGATTGTTCAAAGAATAATTAATATTCGGGATGGCAATTTTTCATGTGTTCCAAAAGATTTAGTTGGGCTGGATTCTCCTATACAAGAATTACAAACTCATTTACTTTTGAACCCTGTTGATGATGTTCGGGCTATAGGAATTTATGGAATGGGAGGAATAGGGAAGACAACCCTTGCCAGAGCTTTGTATGGCCGAAAAATTGCCCAAGAAAATTCAAGCAAAGAGTCAAGAAAGTCGAAAAGGTTGTGGTCTCGGGGACAATTGCACGGTGTTATGTCGGACCATATGGAAAAGAATGGTGAAGCCATAGTTTTGAATTTACTTGATGGTGTTAACTCAGAAGAAGAATTTGAAGAAGAAATAGAAAAGATGTTGATGGATGTAGTGATGGTTGAATACTTTTCAAATCTTAGATTGCTCATCATCAAGCAAGTGGGTGGATACGTGAATTCATCTAAAAGCCTCAGTTGTCTTTCTAACAAATTAAGATATGTTGAATGGTTGAATTATCCATTCATGTATTTGCCATCAAATTTTAAGCCCATTCAACTTGTTGAGTTGATTTTGGTTCAAAGTAGTATCGAAAAACTATGGGAAGGCAAAAAGTATCTGCCCAATTTGAGACATTTGTGTCTATCCTATTCATATAATCTAATAGAGATACCAAATTTTGAAGAGTTCCCGAATCTTGAACAGTTAAATCTGGCAGGATGTAAAAAACTTGTGAAGTTGGATCCTTCTATTGGACTTCTAAGGCATCGCATTCCATGCATTCAACTTCTCCATCTTGAAATGTACCACTCCCGGGGAAGGCAAAATGGTTATGCGCATGACATATTGTCAACCGACATTCTGGCAAATTATAGTCTGCCCCTCTTCATCGCGTATGCTGTAATCGCGGGATCCGAGTCCACACATTTGCAGTTTGGTATGGATTTGCTTTGGGCAATCAAGGATGAGCTTGGTCTTGTTCCTTCACGGCAGTGTCTCGATTTTCTTCTAAGCGCTTGTGCCCAGTCAAAAGATTTGAATAACAGTCGTTTGGTTTGGAGAGAATATGAAGTTTGCGGATATCCTTACAATGTACTGAGTTACGTGAGGATGTATCAAGCACTTTTGGCATCAGGAGATCACAGATCTGCTGAAGTTATACTCAATAAAATTGCAAGAGATGATGCCGAGATTTGTTCTTTAATCTCAGCATGTCAAAAAGTTTACACTGTTAAAACTAAATCACTAGAGTGTGAGAAGGAGAAAGAGACTGTTAAATCAGTAGAAGGGGTGAAGAAGAAAAAGAATGTAAAATCTGTAGAAGGGGATAAGAAGAAAAAGAATGTTACATCAGTGGAGGGGGCGAAGAAGAAAAAGAATGTTACATCAGTAGAAGGGGAGAAGAAGAAGAAAAAGAAAAAGAAAGCAGCAGAAAAGAAAAAAATAGAGTGA 1587 0.3856 MASSSNSSALALVTLPKKRNNYDVFVTFRGTISGWDVRDKPQSAHIKEIVQRIINIRDGNFSCVPKDLVGLDSPIQELQTHLLLNPVDDVRAIGIYGMGGIGKTTLARALYGRKIAQENSSKESRKSKRLWSRGQLHGVMSDHMEKNGEAIVLNLLDGVNSEEEFEEEIEKMLMDVVMVEYFSNLRLLIIKQVGGYVNSSKSLSCLSNKLRYVEWLNYPFMYLPSNFKPIQLVELILVQSSIEKLWEGKKYLPNLRHLCLSYSYNLIEIPNFEEFPNLEQLNLAGCKKLVKLDPSIGLLRHRIPCIQLLHLEMYHSRGRQNGYAHDILSTDILANYSLPLFIAYAVIAGSESTHLQFGMDLLWAIKDELGLVPSRQCLDFLLSACAQSKDLNNSRLVWREYEVCGYPYNVLSYVRMYQALLASGDHRSAEVILNKIARDDAEICSLISACQKVYTVKTKSLECEKEKETVKSVEGVKKKKNVKSVEGDKKKKNVTSVEGAKKKKNVTSVEGEKKKKKKKKAAEKKKIE 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02170 528 PANTHER OS02G0132600 PROTEIN 343 467 - -
Trre7g02170 528 Coils Coil 513 528 - -
Trre7g02170 528 Pfam Leucine Rich repeats (2 copies) 253 294 IPR025875 -
Trre7g02170 528 SUPERFAMILY L domain-like 184 315 - -
Trre7g02170 528 MobiDBLite consensus disorder prediction 480 512 - -
Trre7g02170 528 MobiDBLite consensus disorder prediction 480 528 - -
Trre7g02170 528 Pfam Leucine Rich Repeat 231 250 IPR011713 -
Trre7g02170 528 Gene3D - 54 190 IPR027417 -
Trre7g02170 528 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 57 162 IPR027417 -
Trre7g02170 528 MobiDBLite consensus disorder prediction 513 528 - -
Trre7g02170 528 Gene3D Tetratricopeptide repeat domain 328 528 IPR011990 GO:0005515
Trre7g02170 528 Gene3D Ribonuclease Inhibitor 221 317 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02170 Trre-Chr7 17265887 17269794 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g02170 112 318 WRKY Transcription Factor Family AT5G45050 31.674 6.14e-20 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02170 - - tpra:123908063 294.278
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g02170 7 17265887 17269794 Trre7g02170 7 17265887 17269794 ECH