Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02167 ATGGCTAGTAGCAGCAACTCTTCTTCTTTAGCTTTGGTCACATTGCCAAACAAGAGGAAGAATTATGATGTGTTTGTAACCTTCAGAGGTGAAGACACTCGCTACAATTTCACTGATTTTCTTTTTAATGCCCTCGAAGATAAAGGCATTTCTGTATTCAGGGATGGCACTAATCTTCCAAAAGGTGAATCCATCGGACCCGAACTCCTACGTGCAATTGAAGACTCTCAAGTTTTCGTTGTCATCTTCTCAAAGAACTATGCTTCCTCAACTTGGTGCTTGCAAGAATTGGAAAAGATATGTGAATGCGTTCAAGTGTCTGGAAAACATGTTTTGCCTGTTTTCTTTGATGTTGATCCTTCTGAGGTGCGAAAGCAAAGTGGGATTTATGGTGAAGCCTTTGTCAAACATGAAACTAGATTCCAACAAGACTATGAGATGTCGATGGTGCAAAGATGGAGGAAAGCTCTCACACAAGTGGGAACAAAATCTGGTTGGGATGTACGTTATAAGCCACAATCTGCACAAATTAAAGAGATTGTTCAAAGAATAGTAGATATTCTAGATTGCAAATCTTCATGTGTTTCAAAAGATTTAGTTGGGATGGATTCTCCTATACAAGAATTACAAAGCCATTTATTTTTGAACTCTGTTGATGATGTTCGGACCATAGGAATTTGTGGAATGGGAGGAATAGGGAAGACAACCCTTGCCACTTCTTTGTATACCAAAGTCTCTAATCAATTTGATGCATGCTGTTTTATTGATGATGTTAGCAAAGTTTATAGATCACATGATGGTCCATTTGGTGCACGAAAACAAATTCTACATCAAACTCTCCGCGAAGAACACCATCATATACACAATAATCCTAGCGCAATTAATCTTATGGAACGTAAACTAAGTCGTGTAAGAACCCTTCTAATTCTTGATAATGTTGATCATGTTAAGCAACTAGAAATATTACCGGTGAATCATGAATGGTTAGGTGCAGGTAGTAGAATCATTATCATTTCTAGAGATGAACATATCTTGAGAAAGTATGGGGTGGATGTTGTTTACAAAGTTCCACTCTTGAATGAGACTAACTCTCTAGAATTATTTTGTCGACAAGCTTTCAAACTTGATCATATTTTGAATAGTTATGAAGGTTTGGTTAGTAGCATATTGCATTATACCAATGGCCTACCACTGGCAATTGAAGTATTGGGCTCATTTTTATATGATCGAAATATCTCTGAATGGAGAAGTGCATTATCTAGATTGAGAGAGAGTCCAGACAAAGATGTCATGGATGTGCTACAAATAAGTTTTGATGGGTTAGACCTGGCAGAAAAAGAAATATTCCTTCATATTGCTTGTCTTTTTAACTTTCTTGACGCAGATTATGTTAAAAATGTTCTAAATTGTTGTGGATTTCATGCTGATATTGGATTGAGAATTCTCATTGATAAATCACTTATAATAATTGAGAATGGTGAGATTAGAATGCATAATTTATTGGAAGAGCTAGGCAAAAAAATTGTCCAAGAAAATTCAAGCAAAGAGTCAAGAAAGTGGAAAAGGTTATGGTTTGAGGAACAACTCCACAATGTTATGTCAGACCATATGGAAAAGAATGTTGAAGCCATAGTTTTGGATAATGCATTTGGCGAAGGGATGGGTTTAGTGATGGATGCAATGATGGTGGAATACTTTTCAAATCTTAGATTGCTCATCATCGGCCGTGTGAATAAATACATGAATGCATCAGAAAGCCTCAGTTGTCTTTCTAACGAATTAAGATATGTTGAATGGTTAGATTATCCATTCAAGTATTTGCCATCAAGTTTTCAGCCCAATCAACTTGTGGAGTTGATATTGTTTCAAAGTAGCATCGAACAACTATGGAAAGACAAAAAGTATCTGCCCAATTTGAGAAATTTGTGTCTTGTCGGTTCCGAAAATCTTATAGAGATACCAAATTTTGAAGAGTTCCCGAATCTTGAGCAGTTAAACCTGGAAGGATGTGTAAAACTTGTGAAGTTGGATCCTTCTATTGGACTTCTAACAAAGATTTTTTACTTGAATTTGAAAAGTTGCTTAAGTCTAATAAGCATACCCAACTCCATATTTGGGATCAACTCTCTTGAATACATAAACATAAGTGGGTGTTCCAAAGTGTCGTTTAACAATCCATGGCATTTGAATATAATTGAAAGGGCATCGCATTCAAATGTACCACACTGCATTATGATTCCTTTTATCCCACTCCCGAAGTGCACAACATGGATGTATTGTATGAGTGCAGTTGATATTAGTTTTTGTGGTCTAAGCCAAGTCCCTGATGCAATTGGATGCCTACGTGAGCTACAAAGTTTAAATCTTGAGGGAAACTATTTTGTGTCACTACTCAGCCTCAATCTGCATGAGCTTTCCAAACTTGTATATTTAAACTTGAATCATTGCATGTTTTTGGAATCTTTGCCACAGCTTCCTTTTTCTACTGCTGCAAACTGGGATCTTGATACTAACAGTGGCCATTTGGAAATAGGATTGCACATATTCAACTGTCCTAAATTGGGTGAAAGGGAATGTAGAATTGCATTTTCATGGTTGAAACAATTCATTCAAGCAAACCCACAATTCCATCGTGCGGTTGATATTGTTATTCCTGGAAGTGAAATACCAAGTTGGTTCAATAATCAAAGCGAGGGTGATAGAATACTGATAGACAACTCTCCCATTATGCATGACTTTAACAATGATATCATTGGATTTCTATGTTGTTCACTATTTTCTGTGGAACCTAGTACTCAACCCACAGGTTTCTGCTACCTACATCGGGGAAAAATTGACCTCCGGATTAAACTTCATTTAACCGGCTTTTACTTAAACGGTACAGTGAACAAGACGGATCATCAACATTCTCTTCCGGTATATTACAAAGAACGAGATCTTATTAAGGTCAAAACAAATCACATTTGTCTAACCTATTTCCCCCGGAAGTTATCCTGGTATGTTCCGGACTTTCATGGCACAATGGATGTTAAATTTGATTACTGTTATGGTTGGGTGAACAATGAGGTGATGAATTGCGGATATGGCTGGCTACATAAACAGGATCTACAAGAGTTCAACTTAACAACAACGCATCCTGGAAACTCCTCAACTCTAAAGCGCAAGTTTTTGGCAATAGAAGACGTTCATTCATCTGATTAA 3201 0.3693 MASSSNSSSLALVTLPNKRKNYDVFVTFRGEDTRYNFTDFLFNALEDKGISVFRDGTNLPKGESIGPELLRAIEDSQVFVVIFSKNYASSTWCLQELEKICECVQVSGKHVLPVFFDVDPSEVRKQSGIYGEAFVKHETRFQQDYEMSMVQRWRKALTQVGTKSGWDVRYKPQSAQIKEIVQRIVDILDCKSSCVSKDLVGMDSPIQELQSHLFLNSVDDVRTIGICGMGGIGKTTLATSLYTKVSNQFDACCFIDDVSKVYRSHDGPFGARKQILHQTLREEHHHIHNNPSAINLMERKLSRVRTLLILDNVDHVKQLEILPVNHEWLGAGSRIIIISRDEHILRKYGVDVVYKVPLLNETNSLELFCRQAFKLDHILNSYEGLVSSILHYTNGLPLAIEVLGSFLYDRNISEWRSALSRLRESPDKDVMDVLQISFDGLDLAEKEIFLHIACLFNFLDADYVKNVLNCCGFHADIGLRILIDKSLIIIENGEIRMHNLLEELGKKIVQENSSKESRKWKRLWFEEQLHNVMSDHMEKNVEAIVLDNAFGEGMGLVMDAMMVEYFSNLRLLIIGRVNKYMNASESLSCLSNELRYVEWLDYPFKYLPSSFQPNQLVELILFQSSIEQLWKDKKYLPNLRNLCLVGSENLIEIPNFEEFPNLEQLNLEGCVKLVKLDPSIGLLTKIFYLNLKSCLSLISIPNSIFGINSLEYINISGCSKVSFNNPWHLNIIERASHSNVPHCIMIPFIPLPKCTTWMYCMSAVDISFCGLSQVPDAIGCLRELQSLNLEGNYFVSLLSLNLHELSKLVYLNLNHCMFLESLPQLPFSTAANWDLDTNSGHLEIGLHIFNCPKLGERECRIAFSWLKQFIQANPQFHRAVDIVIPGSEIPSWFNNQSEGDRILIDNSPIMHDFNNDIIGFLCCSLFSVEPSTQPTGFCYLHRGKIDLRIKLHLTGFYLNGTVNKTDHQHSLPVYYKERDLIKVKTNHICLTYFPRKLSWYVPDFHGTMDVKFDYCYGWVNNEVMNCGYGWLHKQDLQEFNLTTTHPGNSSTLKRKFLAIEDVHSSD 1066
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02167 1066 SUPERFAMILY Toll/Interleukin receptor TIR domain 17 166 IPR035897 -
Trre7g02167 1066 Gene3D - 191 353 IPR027417 -
Trre7g02167 1066 FunFam Disease resistance protein (TIR-NBS-LRR class) 18 190 - -
Trre7g02167 1066 Gene3D Ribonuclease Inhibitor 738 868 IPR032675 -
Trre7g02167 1066 Gene3D Ribonuclease Inhibitor 506 737 IPR032675 -
Trre7g02167 1066 Pfam C-JID domain 884 1036 IPR045344 -
Trre7g02167 1066 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 191 452 IPR027417 -
Trre7g02167 1066 Gene3D - 16 190 IPR035897 -
Trre7g02167 1066 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 22 841 IPR044974 GO:0006952
Trre7g02167 1066 Pfam NB-ARC domain 205 427 IPR002182 GO:0043531
Trre7g02167 1066 Gene3D - 358 442 IPR042197 -
Trre7g02167 1066 SMART till_3 21 163 IPR000157 GO:0007165
Trre7g02167 1066 SUPERFAMILY L domain-like 567 857 - -
Trre7g02167 1066 SUPERFAMILY "Winged helix" DNA-binding domain 429 532 IPR036390 -
Trre7g02167 1066 PRINTS Disease resistance protein signature 223 238 - -
Trre7g02167 1066 PRINTS Disease resistance protein signature 393 407 - -
Trre7g02167 1066 PRINTS Disease resistance protein signature 803 819 - -
Trre7g02167 1066 PRINTS Disease resistance protein signature 300 314 - -
Trre7g02167 1066 ProSiteProfiles TIR domain profile. 20 188 IPR000157 GO:0007165
Trre7g02167 1066 Pfam TIR domain 21 191 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02167 Trre-Chr7 17242239 17246336 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g02167 20 823 WRKY Transcription Factor Family AT4G12020 29.526 3.48e-83 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02167 - - mtr:11446628 1151.35