Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02166 ATGGTTGGATACTTTTCAAATCTTAGATTGCTCATCATCAGGCATGGGAATAAATCAAGAAGCCTTAGTTGTCTTTCTATCAAGGATGTGAATATATCAGGAAGCCTTAGTTGTCTTTCGAACGAATTAAGATATGTTGAATGGGAGGATTATCCATTCATGTATTTGCCATCAAGTTTTCAGCCCATTCAACTTGTTGAATTGATCTTGAAGCATAGCAGCATCAAATACCTGTGGAAAGACAAGAAGTATCTGCCCAAATTGAGAAAGTTGTGGCTACCCGAAAGCCGAAATCTAATAGAGATGCCAAATTTTGATGATTTCCCGAATCTTGAGCAGTTAGATCTGGAAGGATGTGAAAGCCTTGTGAAGTTGGACCCATCTATTGGACTTCTAAGTAAGCTTGTTTACTTGAATTTGAAAGGGTGCTCAAGTCTAAAAAGTATATCCAACACCATATTTGGTCTCAGCTCTCTTGAATACTTATACATGAGTGGGTGTTCCAAAGTGTCGTTTAACAATCCAAGGGCATCTTCAATACAATTGTTTGGTCGCACTATCGTTCCTTTTACGGCACCCCCAGTTCAGGTAGAATGGTTATATTGTATGAGTTCAATTGATATTAGTTTTTGTGGTCTACACCAACTCCCTGATGCAATTGGATGCCTACATCAGCTACAAAGTTTAAATCTTGAGGGAAACTATTTTGTGTCACTACTCAACCTCAATCTTAATGAGCTTTCCAAACTTGTATATTTAAACTTGGATCATTGCGTGTTTTTGGAATCTTTGCCTCAGCTTCCTTTTCCGACTGCTATCAATTGGGATCCTTTCAAAATAGGATTGTACATTTTCAACTGTCCTAAATTGAATGAGAGGGAATGTAGAATTGCATTTTCATGGTTGATACAATTCATTCGAGCAAACCCACAATTCTCTGATGTGATTGATATTGTTTTTCCTGGAAGTGAAATACCAAGTTGGTTCAACAATCAGAGCGAGGGTGATAGAATACTGATAGACTACTCTCCCATTAAACATGACATTAATAATGATATCATTGGTCTTGTATGTTGTTCAGTATTTTCTATAGAACCAAGTGAACAGCCAATATCTCCATATCCGGGAACAACTGCACTCAAGATTGAACTTCATTTAACTGGTTTTTATTTAGGTGGTAAAGTGGCCATGTCATATTGGCCAGAGCCATATCATCATAATACTATTCTACTATCTTTCGAAAGAAATCTTATTAATTGCAAAACAAATCACATTTGGCTAACCTATTTCCCTCGGAAGTTGTCCTGGTATGTTCGGGACTTTCATGGCACAATGATTGTTAAATTTGGAAATTTTCAACCTCGCGTCAATAATAAGGTGAAGAATTGCGGATATGGCTGGCTACATAGAAAGGGTCTACAAGAGTTCAACTTAACAACAATGCATTCTGTGGATTCCTTAGCTCTGAAGTTCAAGTCTTTGACAATTCAAGATGAGGCAAGTCCACAACTACACTCATTCATCTGA 1527 0.3739 MVGYFSNLRLLIIRHGNKSRSLSCLSIKDVNISGSLSCLSNELRYVEWEDYPFMYLPSSFQPIQLVELILKHSSIKYLWKDKKYLPKLRKLWLPESRNLIEMPNFDDFPNLEQLDLEGCESLVKLDPSIGLLSKLVYLNLKGCSSLKSISNTIFGLSSLEYLYMSGCSKVSFNNPRASSIQLFGRTIVPFTAPPVQVEWLYCMSSIDISFCGLHQLPDAIGCLHQLQSLNLEGNYFVSLLNLNLNELSKLVYLNLDHCVFLESLPQLPFPTAINWDPFKIGLYIFNCPKLNERECRIAFSWLIQFIRANPQFSDVIDIVFPGSEIPSWFNNQSEGDRILIDYSPIKHDINNDIIGLVCCSVFSIEPSEQPISPYPGTTALKIELHLTGFYLGGKVAMSYWPEPYHHNTILLSFERNLINCKTNHIWLTYFPRKLSWYVRDFHGTMIVKFGNFQPRVNNKVKNCGYGWLHRKGLQEFNLTTMHSVDSLALKFKSLTIQDEASPQLHSFI 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02166 508 Gene3D Ribonuclease Inhibitor 1 179 IPR032675 -
Trre7g02166 508 Pfam C-JID domain 320 429 IPR045344 -
Trre7g02166 508 SUPERFAMILY RNI-like 6 308 - -
Trre7g02166 508 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 5 170 IPR044974 GO:0006952
Trre7g02166 508 Gene3D Ribonuclease Inhibitor 180 292 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02166 Trre-Chr7 17239104 17241000 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g02166 30 265 WRKY Transcription Factor Family AT4G12020 38.115 8.51e-27 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02166 - - mtr:11446628 431.409