Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02165 ATGGAATATGTGAATTCATCTGAAAGCCTCAGTTGTCTTTCTAACGAATTAAGATATGTTCAATGGTGGAAATATCCATTCATGTATTTGCCATCAAGTTTTCAGCCCATTCAACTTGTTGAGTTGATATTGTTTCAAAGTAGCATCAAACAACTATGGAAAGGCAAAAAGTATCTGCCCAATTTGAGACATTTGAATCTACGCTTTTGCGAAAATCTAATAGAGATACCAAATTTTGAGGAGTTCCCAAATCTTGAGCAGTTAAATCTGTATCGATGTGTAAAACTTGTGAAGTTGGATCCTTCTATTGGAGTTCTAAGAAAGCTTTTTTACTTGGATTTGAAAGATTGCTTCAGTCTAAAAGGCATACCCACCAACACCATATTTGGGATGAGATCTCTTAAATACATAAACATGAGTGGCTGTTCCAAAGTGTCGTTTAACAATCCAAGGGCATCACATTCCCTCCAGTCAACTTCTCCATCTTCAAATGTACCACCACACCGCAGTATCATTGCTCATTCCCTTTCATCGAGGGAAGAATGGTTATATTCTTTGAATGAAATTGATATCAGTTATTGTGGTCTACGCCAACTCCCTGATGCAATTGGATGCCTACATCAGCTACAAAGTTTAAATCTTGAGGGAAACTATTTTGTGTCACTACCCAGCCTGAATGAGCTTTCAAAACTTGTATATTTAAACTTGAATCATTGCAAGTTTTTGGAATATTTGCCTCAACTTCCTTTTCCTACTGCTGTCAATTGGGATCTTCTTATTCATAAAATAGGATTGCACATGCTCAGATGTCCTAAATTGGGTGAGAGGGAACTTAGAATTGCATTTTCTTGGATGACACAATTGATTCAAGCAAACCCACAATTCTCTGGATTTATTGAGATTAATGTTCCTGGAACTAAAATACCAACTTGGTTTATGAAACTTTTTGAACAAAGCGTGGGCGGTAGAATACGGGTAGACAACTCTCCCATTAAACATGACGTTGACAATGATATCATTGGCCTTCTATGTTGTTCACTACTAAATTCGATTCGGATAACCTATATCCCCCGGATGTGGACCCAGAAAGTTAACGGATTTATTCGTGGCACATATGATATTAAAGTCATGTATCCTCCTTGGGTGCATTTGCGGATATGGCTGGGTACATAA 1173 0.3751 MEYVNSSESLSCLSNELRYVQWWKYPFMYLPSSFQPIQLVELILFQSSIKQLWKGKKYLPNLRHLNLRFCENLIEIPNFEEFPNLEQLNLYRCVKLVKLDPSIGVLRKLFYLDLKDCFSLKGIPTNTIFGMRSLKYINMSGCSKVSFNNPRASHSLQSTSPSSNVPPHRSIIAHSLSSREEWLYSLNEIDISYCGLRQLPDAIGCLHQLQSLNLEGNYFVSLPSLNELSKLVYLNLNHCKFLEYLPQLPFPTAVNWDLLIHKIGLHMLRCPKLGERELRIAFSWMTQLIQANPQFSGFIEINVPGTKIPTWFMKLFEQSVGGRIRVDNSPIKHDVDNDIIGLLCCSLLNSIRITYIPRMWTQKVNGFIRGTYDIKVMYPPWVHLRIWLGT 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02165 390 Gene3D Ribonuclease Inhibitor 1 146 IPR032675 -
Trre7g02165 390 Gene3D Ribonuclease Inhibitor 168 273 IPR032675 -
Trre7g02165 390 Pfam Leucine Rich repeats (2 copies) 60 101 IPR025875 -
Trre7g02165 390 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 9 146 IPR044974 GO:0006952
Trre7g02165 390 SUPERFAMILY L domain-like 11 288 - -
Trre7g02165 390 ProSiteProfiles Leucine-rich repeat profile. 208 229 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02165 Trre-Chr7 17230541 17232332 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g02165 8 260 WRKY Transcription Factor Family AT4G12020 32.331 2.69e-21 94.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02165 - - mtr:11446628 342.043