Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02146 ATGGCGTGTAGTAGCATCCAACGTGTCTCTTCACCTAAGATGGCATGGAAATATGATGTATTTGTGAGCTTTAGAGGTGAAGATACGCGAAACAATTTCACTGATCACCTTTTTGGCGCTCTCCATAAAAAAGGCATTGCTGCCTTTCAGGATGATACAAAGCTCAAAAAAGGAGAACATATATCATCTGAGCTTCTACAAGCCATTGAAGGTTCCCATATTTTAATTGTAATCCTCTCAAGAAACTATGCTTCTTCAACATGGTGCTTGCAAGAACTGACAAAAATTACTGAATGCATCGAAGTACAAGGACAAACTGTTCTACCTGTTTTCTATGATGTGAGTCCATCTGAGGTACGAAAACAAAGCGGAGATTATGAAAAATCTTTTATGGAGCATGAAGTAAGATTCAAAGAAAACTTAGAGGAAGTGCAAAGATGGAGGGGTGCCCTAACACAAGTAGCCAATCTCTCTGGTTGGGATGTAAGGGATAAGCCACAATATACCGAGATTGGAAAAATTATTAAACAGGTAACATGCTTATTGGGAAGCAAATCTTCAACTTTTCCCGGTGATATAGTTGGGATGCACTCAAGAGTGGAAGAATTAGAAAAGCTTTTGATTTTGGATTCAGATGATGATGTTCGAGTTGTAGGGATATGTGGAATGGGTGGAATAGGGAAGACAACTCTTGCGACTGCTTTGTATGCTAGAATCTGTAATCAATTTGATAGTTGCTGCTTTATTGATGATGTAAGTAAAATTTATGGAGACTATGGCCCAATTGGAGTGCAAAAGCAACTTCTTTGTCAAACTCTAAATGAAGAAAATCTTCAGATATGCAATCTTTTTGTGGCATCTAATTTGATTCAAACTAGGCTATGTCAAATAAAATCTCTTGTAGTTCTCGATAATGTTGATCAAGTTGAACAACTGGATAATTTGGCCGTGAAACGAGAATGTCTAGGCACTGGGAGCAGAATCATCGTAATTTCTAGAGATTTTCATATCTTGAGAGAGCATGGAGTAGATGAAATTTACAAAGTTCAACTCTTGGATCATAGCAATGCCCTTCAATTGTTTTGTAGGAAAGCTTTCAAAAGGGATGATATCATGAGCGGTTACATATACTTGACGTATGATGTACTAAAATATGCCAATGGCCTTCCATTAGCAATTAAAGTGTTGGGCTCATTTTTGTATGGTCGAGATGTCTCTGAATGGAGAAGTGCATTGGCAAGATTAAGAGTGAATCCAAGACCAGATATTATGGATATACTCCGAATTAGTTTTGATGGACTAGAGGATACGGAAAAGGATATATTTCTTGATATTGCTTGTTTCTCTGATGGAGACGATGCGACACGTGTGAAGGAAATTTTAGATTTTCGTGGATTTCATCCCGAAATTGGTTTAAGAGTTCTCATTGATAAATCATTCATAACTTGTGAAGAGGGGAGAATTTGTATGCATGATTTGTTCAAAGAACTTGGCAAGAGCATCGTTAGAGAAAAATCCCCTAAAGAACCAAGAAAGTGGAACAGGATGTGGGACTACAAGGATGTCCACAATGTTATCTCAGAAAACATGGAAACAAAAAACCTTGAAGCCATAGTTCTGCAACCTTATCCTTATAATATTGATGAAATACAAGCAATGTCAACATTGAGGGCTGAAAGTTTAGCACAAATGAATCGCCTTAAACTGCTCATGCTGTGCAATTTGAATTTCTCAGGAAGTCTCAATTTTCTTTCTAGTGAATTGGGGTATCTATGTTGGGATAAATACCCTTTCACTTGTTTGCCATCGAGTTTTGAGCCAGATAAACTTGTTGAACTGATCCTACCTTGTAGCAACATCAGGCAACTATGGGAGGGCACAAAGTCTCTGCACAATTTGACGTATATTGATCTTTCTCATTCAATAAATCTTATGATGACGCCAAATTTTTTGGAGATTCCGAATCTTGAGTTCCTAAATCTTGAAGGATGTATAAAACTCGTACAGATTGATCCATCGATTGGTATCTTAAGAAGGCTTTCCAAATTAAATTTGAAAAATTGTACAAATCTAGTAAGTATTCCTAACAACATTTTCAGTCTGAGTTCTCTCAAAGATCTAAATCTCTCAGGCTGTCCAAAATTACTTAGTAACCTGGTTTCAAATAGACAACGGGAAATAGAACATTTGGAGATTCTTGATAACAAAGAAAGTATTACCCAATACCAGTCAACATCCTTCACCGGACCCGACGATCATTCGGTTTCTTTATTGTTGCCTTTGTGGTCTCATATGTCATGTTTGCAATATCTAGACCTAAGTTTCTGCAATCTTGTTCAAATCCCTAATGCTATTGGGTGGTTACACTGCTTAGAAACACTAAATTTGGGGGGTAACAATTTTGTTACATTACCTTCCATCAAGGAACTTTTCAAACTTAGAGAATTGAACTTGGAGCACTGTAAGCGGCTGAAATATTTATCTGAACTCCCATCAAAAACTGTCTTGCCAGTAAGAGAAACTTTTTTTGTCAGGGGGGGATTAAATATTTTTGATTGCCCCAGTTTGATTGTGACGGAACGCTGTTATAGAATGGTTTTTTCTTGGATGATACAACTCCTTAAGGTGTACATGAAATCTGATCTCCAAATGGCTCAGATTGATATTGTTATTCCAAAAACTCAAATTCCAATGTGGTTCAACAAACAAAACGTCAGTAGTTCAATAAGCATGGATCCATTACCAAATATCGATGACAAGAATTTCATAGGTGTTGCTTGCTGCATAACATTTGTAGCACATGATGATCCAACTAGTTTAGGTAATGAATGGCGAACGGATGAACCTTATATTAGGTTGGGTTTTAGAAGTATACGGTATGGAGTCTATCCTGTTACTCCTATACATCTTGAAAAAGATTTGGTCACGGTTGAGTTAGATCACCTGTTGCTAATTTTTTGCAGTAAGGCAGATTTTATTTACACAAAAAGTTTTATAACAAAAGGATTGCATGATAATAGTAGTATTGAATTGGTAGCCGATGTTGAGCAGCTTCCTGGTTTGCACTTTGAGATCAAAAGTTGTGGTTATCATTGGATATTTAAGGAGGATCTGGAACAATTAAACCCTCAAATGATGTACAGCGAAAATTCCTCAGTTCAGCCATATTATTGA 3174 0.3693 MACSSIQRVSSPKMAWKYDVFVSFRGEDTRNNFTDHLFGALHKKGIAAFQDDTKLKKGEHISSELLQAIEGSHILIVILSRNYASSTWCLQELTKITECIEVQGQTVLPVFYDVSPSEVRKQSGDYEKSFMEHEVRFKENLEEVQRWRGALTQVANLSGWDVRDKPQYTEIGKIIKQVTCLLGSKSSTFPGDIVGMHSRVEELEKLLILDSDDDVRVVGICGMGGIGKTTLATALYARICNQFDSCCFIDDVSKIYGDYGPIGVQKQLLCQTLNEENLQICNLFVASNLIQTRLCQIKSLVVLDNVDQVEQLDNLAVKRECLGTGSRIIVISRDFHILREHGVDEIYKVQLLDHSNALQLFCRKAFKRDDIMSGYIYLTYDVLKYANGLPLAIKVLGSFLYGRDVSEWRSALARLRVNPRPDIMDILRISFDGLEDTEKDIFLDIACFSDGDDATRVKEILDFRGFHPEIGLRVLIDKSFITCEEGRICMHDLFKELGKSIVREKSPKEPRKWNRMWDYKDVHNVISENMETKNLEAIVLQPYPYNIDEIQAMSTLRAESLAQMNRLKLLMLCNLNFSGSLNFLSSELGYLCWDKYPFTCLPSSFEPDKLVELILPCSNIRQLWEGTKSLHNLTYIDLSHSINLMMTPNFLEIPNLEFLNLEGCIKLVQIDPSIGILRRLSKLNLKNCTNLVSIPNNIFSLSSLKDLNLSGCPKLLSNLVSNRQREIEHLEILDNKESITQYQSTSFTGPDDHSVSLLLPLWSHMSCLQYLDLSFCNLVQIPNAIGWLHCLETLNLGGNNFVTLPSIKELFKLRELNLEHCKRLKYLSELPSKTVLPVRETFFVRGGLNIFDCPSLIVTERCYRMVFSWMIQLLKVYMKSDLQMAQIDIVIPKTQIPMWFNKQNVSSSISMDPLPNIDDKNFIGVACCITFVAHDDPTSLGNEWRTDEPYIRLGFRSIRYGVYPVTPIHLEKDLVTVELDHLLLIFCSKADFIYTKSFITKGLHDNSSIELVADVEQLPGLHFEIKSCGYHWIFKEDLEQLNPQMMYSENSSVQPYY 1057
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02146 1057 Pfam TIR domain 17 164 IPR000157 GO:0007165
Trre7g02146 1057 PRINTS Disease resistance protein signature 386 400 - -
Trre7g02146 1057 PRINTS Disease resistance protein signature 699 715 - -
Trre7g02146 1057 PRINTS Disease resistance protein signature 217 232 - -
Trre7g02146 1057 PRINTS Disease resistance protein signature 293 307 - -
Trre7g02146 1057 SMART till_3 17 157 IPR000157 GO:0007165
Trre7g02146 1057 Gene3D - 12 184 IPR035897 -
Trre7g02146 1057 Gene3D Ribonuclease Inhibitor 752 843 IPR032675 -
Trre7g02146 1057 ProSiteProfiles TIR domain profile. 16 182 IPR000157 GO:0007165
Trre7g02146 1057 SUPERFAMILY Toll/Interleukin receptor TIR domain 14 160 IPR035897 -
Trre7g02146 1057 Pfam Leucine Rich Repeat 609 628 IPR011713 -
Trre7g02146 1057 ProSiteProfiles Leucine-rich repeat profile. 790 811 IPR001611 GO:0005515
Trre7g02146 1057 Pfam C-JID domain 891 1039 IPR045344 -
Trre7g02146 1057 SUPERFAMILY L domain-like 490 829 - -
Trre7g02146 1057 Gene3D Ribonuclease Inhibitor 546 746 IPR032675 -
Trre7g02146 1057 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 18 718 IPR044974 GO:0006952
Trre7g02146 1057 Gene3D - 185 345 IPR027417 -
Trre7g02146 1057 FunFam Disease resistance protein (TIR-NBS-LRR class) 14 184 - -
Trre7g02146 1057 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 186 445 IPR027417 -
Trre7g02146 1057 Gene3D - 351 435 IPR042197 -
Trre7g02146 1057 Pfam NB-ARC domain 199 416 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02146 Trre-Chr7 17044695 17048340 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g02146 8 798 WRKY Transcription Factor Family AT4G12020 30.198 1.18e-81 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02146 - - tpra:123922646 1501.88