Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02144 ATGGCATGTGGTAGAATCCAACGTCTGTCTTCACCTAAGATGACATGGAAATATGATGTATTTGTGAGTTTTAGAGGTGAAGATACGCGGAACAATTTCACTGATCACCTTTTTGGCGCTTTTCATAGAAAAGGCGTTGTTGCCTTCAAGGATGATACAAAGCTCAAGAAAGGGGAACATATATCATCTGAGCTTCTAAAAGCCATCGAAGGATCTCAAATTTTGATTGTTATCTTCTCAAGAAACTATGCTTCTTCCACATGGTGCTTGGAGGAACTAGCAAAAATTGCTGAATGCAATGTATTATTAGAACAAACTGTGCTACCTATTTTCTATGATGTGAGTCCATCTGAGGTACGTAAGCAAAGCGGAGACTTTGAAAAAGCCTTTATGGAGCATGAAGAAAGATTCAAAGAAAACTTAGAGGAAGTGCAAAGATGGAGGAGAGCTCTAACACAAGTAGCCAATCTCTCTGGTTGGGATGTAAATGATAAGCCAGAATATGCAGAGATTGGAAAAATTATTAAAGAGGTAACATGCTTATTGGGTCACAAATTTTCAACTTCACCTGACGATATAGTTGGGATGCACTCAAAAGTGGAAGAATTAGAAAAGCTTCTGATTTTGGACTCCGATGAAGATGTTCGAGTTGTTGGGATTTGTGGAATGGGAGGAATAGGGAAGACAACGCTTGCTAATGCTTTGTATGCTAGAATCTCTAATCAATTTGAAAATTGCTGCTATATTGATGATGTAAGTAAAATTTATGGAGGTTATGGCCCAATTGGAGTGCAAAAGCAACTTCTTTGTCAAACTCTAAATGAAGAAAATCTTCAGATATTGAATCATTCTATGGCATCTAATTTGATTCAATCTAGGCTATGTCAAATAAAATCTCTTGTAGTTCTTGATAATGTTGATCAAGTTGAACAACTGGATAAATTGGCCATGAAACGAGAATGGCTAGGCACTGGGAGCAGAATCATCGTAATTTCTAGAGATTGTCATATCTTGAGAGAGCATGAAGTAGATGAAGTTTACAAAGTTGAACTCTTGGATCATAGTAATGCCCTTCAATTGTTTTGTAGGAAAGCTTTTAAAAGTGATGATATCATGAGTGGTTACATAGACTTGTCATATGATGTACTAAAATATGCCAATGGCCTTCCATTAGCAATTAAAGTGTTGGGCTCATTTTTGTATGGCCGAGATGTATCTGAATGGAGAAGTGCATTGGCAAGATTAAAGGAGAATCCAAGGGCAGATATTATGGATGTACTCCGTACTAGTTTTGATGGACTAGAGGATACAGAAAAGGATATATTTCTAGATATCGCTTGTTTCTTTGATAGAGACAATGAGACAAGTGTGAAGAAATTTTTAGATATTCGTGGATTTCATCCTGAAATTGGTTTAAGAGTTCTCATTGACAAATCATTTATAACCTGTAAGAGAAGGGGTATTTATATGCATGATTTATTCAAAGAATTGGGCAAGAGCATCGTTAGAGAAAAATCACCCAATGAACCAAGAAAGTGGAGTAGGATTTGGGACTACACGGATTTCCACAATGTTATCTCAGAAAACAAGGGATCAGAAAACCTTGGAGCTATAGTTGTGCGGCATTTTCCAAAATACGATGAAGAAATAGAAGCAATGACAACATTGAGGGCTGATGCTTTATCTCAAATGGGTAGCCTTAAATTGCTCATACTGCGGAGTTTAAATTTTTCTGGAAGTCTCAATTTTCTTTCAAGTGAATTGGGGTATCTTTTGTGGGATAAATATCCTTTCACTTGTTTGCCATCAAGGTTTGAGCCGGATAAACTTGTTGAACTTATCCTACGTCATAGCAACATCAGTAAATTATGGGAGGGCCCAAAGGCTCTACCCAATTTGATATATATTGATCTCTCTTACTCTAGAAATCTTATTAAGATGCCAAGTTTTTTGGAGATTCCAAATCTTGAGCGGCTTGATCTTCGAGGATGTATAAAACTTGTGCAGATTGATCCATCCATTAGTATCTTAAGAAGGCTTTCTGAATTAAATTTGGAAAATTGTACAAATCTGGTCAGTATTCCTAACAACATTTTTGGTCTGAGTTCTCTCGAGTATCTAAATCTCTCAGGCTGTCAAAAATTACTTAATAATAAGTTGTTAAAGAGACAAAGGCAAATAGAAAATTTGGAGATGCTTGATAAGAAAGAAAGTACTACCCAATATCAATCAACAGCAGTCACAGTTATGAAGCCTTCTTTTTGGTATTGGAAGATTTTTCGAAAACAAGAAAATTCAGTATGCTTATTGTTGCCTTCTTCGTCCCGTCTGTCATGTTTAATTAGTCTTAACGTAAGTTTCTGCAATCTTCTAGAAATCCCTAATGCTATCGGGTGGTTACATTCCTTAGAAAGGCTAAATTTGGGGGGGAACAATTTTGTTACACTACCTTCTAGCATCAAGGAACTTTCCAAACTTAGACATTTGAACATGGAGCACTGTACGCAGCTGAAACATTTTCCTGAACTCTCATCAAAATTTGTCCTGCCAATAAGAGAAACATTTTGTGGTGCATATGATATGAAATTATATATTTTTGATTGCCCGAATTTAATTGAGACGGACTGCTGTTATAAAATGGCTTTTTCTTGGATGATACAATTCCTTAAGGTGTACATGAAATCCGATCTCCGAATAGGTGTGATTAAGATTGTTATTCCTAGAACTCAAATTCCAATGTGGTTCAATAAACAAAATGCGGGTAGTTCAATAAGCATGGATCCATTACCCAATATGGAGGACAATAATTTGATAGGTGTTGCTTACTGCTTTACAATTGTAGCACATGATGATGAAATGCCCTCTTGTATTTGGTTCGATTTTAGAGGTAAACGAGGGTTGTCCTCGTCCTATATTTTCATGCATCTTGGAAACTATCGGGTTACAGTTGATTTAGATCACCTGTGTCTACTTTTTTTCACTAGGGAAATGTTTATTGATTGTACGATTAATCATCAACCTCCTATAACAGATGGATTTCATGATATTATTGAATTTGAAGTTTCTGTTGAGCAGCCCTTTGGTTTGCATTTGGAGATCAAAAGTTGTGGTTATCGTTGGATATTTAAGGAGGATCTAGAACAATTAAACTCACAAATGTATTTAACAAATGATTAG 3177 0.361 MACGRIQRLSSPKMTWKYDVFVSFRGEDTRNNFTDHLFGAFHRKGVVAFKDDTKLKKGEHISSELLKAIEGSQILIVIFSRNYASSTWCLEELAKIAECNVLLEQTVLPIFYDVSPSEVRKQSGDFEKAFMEHEERFKENLEEVQRWRRALTQVANLSGWDVNDKPEYAEIGKIIKEVTCLLGHKFSTSPDDIVGMHSKVEELEKLLILDSDEDVRVVGICGMGGIGKTTLANALYARISNQFENCCYIDDVSKIYGGYGPIGVQKQLLCQTLNEENLQILNHSMASNLIQSRLCQIKSLVVLDNVDQVEQLDKLAMKREWLGTGSRIIVISRDCHILREHEVDEVYKVELLDHSNALQLFCRKAFKSDDIMSGYIDLSYDVLKYANGLPLAIKVLGSFLYGRDVSEWRSALARLKENPRADIMDVLRTSFDGLEDTEKDIFLDIACFFDRDNETSVKKFLDIRGFHPEIGLRVLIDKSFITCKRRGIYMHDLFKELGKSIVREKSPNEPRKWSRIWDYTDFHNVISENKGSENLGAIVVRHFPKYDEEIEAMTTLRADALSQMGSLKLLILRSLNFSGSLNFLSSELGYLLWDKYPFTCLPSRFEPDKLVELILRHSNISKLWEGPKALPNLIYIDLSYSRNLIKMPSFLEIPNLERLDLRGCIKLVQIDPSISILRRLSELNLENCTNLVSIPNNIFGLSSLEYLNLSGCQKLLNNKLLKRQRQIENLEMLDKKESTTQYQSTAVTVMKPSFWYWKIFRKQENSVCLLLPSSSRLSCLISLNVSFCNLLEIPNAIGWLHSLERLNLGGNNFVTLPSSIKELSKLRHLNMEHCTQLKHFPELSSKFVLPIRETFCGAYDMKLYIFDCPNLIETDCCYKMAFSWMIQFLKVYMKSDLRIGVIKIVIPRTQIPMWFNKQNAGSSISMDPLPNMEDNNLIGVAYCFTIVAHDDEMPSCIWFDFRGKRGLSSSYIFMHLGNYRVTVDLDHLCLLFFTREMFIDCTINHQPPITDGFHDIIEFEVSVEQPFGLHLEIKSCGYRWIFKEDLEQLNSQMYLTND 1058
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02144 1058 Gene3D - 183 348 IPR027417 -
Trre7g02144 1058 Pfam NB-ARC domain 199 420 IPR002182 GO:0043531
Trre7g02144 1058 ProSiteProfiles TIR domain profile. 16 182 IPR000157 GO:0007165
Trre7g02144 1058 FunFam Disease resistance protein (TIR-NBS-LRR class) 14 183 - -
Trre7g02144 1058 SMART till_3 17 157 IPR000157 GO:0007165
Trre7g02144 1058 Pfam TIR domain 17 164 IPR000157 GO:0007165
Trre7g02144 1058 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 184 445 IPR027417 -
Trre7g02144 1058 SUPERFAMILY Toll/Interleukin receptor TIR domain 13 160 IPR035897 -
Trre7g02144 1058 Pfam Leucine Rich Repeat 609 626 IPR011713 -
Trre7g02144 1058 Gene3D - 351 435 IPR042197 -
Trre7g02144 1058 Gene3D Ribonuclease Inhibitor 758 878 IPR032675 -
Trre7g02144 1058 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 18 718 IPR044974 GO:0006952
Trre7g02144 1058 Gene3D - 12 182 IPR035897 -
Trre7g02144 1058 Pfam C-JID domain 907 1047 IPR045344 -
Trre7g02144 1058 SUPERFAMILY L domain-like 561 845 - -
Trre7g02144 1058 SUPERFAMILY "Winged helix" DNA-binding domain 422 525 IPR036390 -
Trre7g02144 1058 Gene3D Ribonuclease Inhibitor 548 753 IPR032675 -
Trre7g02144 1058 PRINTS Disease resistance protein signature 386 400 - -
Trre7g02144 1058 PRINTS Disease resistance protein signature 217 232 - -
Trre7g02144 1058 PRINTS Disease resistance protein signature 293 307 - -
Trre7g02144 1058 PRINTS Disease resistance protein signature 699 715 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02144 Trre-Chr7 17025005 17028789 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g02144 8 806 WRKY Transcription Factor Family AT4G12020 30.476 1.51e-89 314
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02144 - - tpra:123922646 1446.8