Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02143 ATGGCAACAGAAAACCTTGAAGCCATAGTTATTCAGCAGTACACACAAAATAAGGACGAAATAGAAGCAATGACAACATTGAGGGCTGAAGCTTTAGCACAGATGAGTCGCCTTAAATTGCTCATGCTGTGGCATTTGAATTTCTCAGGAAGTCTAAATTTTCTTTCAAGTGAACTGGGCTATCTCTGTTGGAATAAATATCCTTTCACTTGTTTGCCATCAAGGTTTGAGCCGGATAAACTTGTTGAACTGATCCTACGTCATAGCAACATCAAGAAACTATGGAAGGGCAAAAAGTCTCTGCACAATTTGATGCATATTGATCTTTCTCATTCAAAAAATCTGATTATGATGCCAAACTTTTTGGAGATTCCGAATCTTGAATTGCTAAATCTTGAAGGATGTATAAAACTCGAACAGGTTGATCCATCAATTAGTATATTAAGAAGGCTTTCCAAATTAAATTTGAAAAATTGTACAAATCTAGTAAGTATTCCTAACAACATTATCGGTCTGAGCTCTCTCAAAGATCTAAATCTCTCGGGCTGTCCAAAATTACTTAATAATCTGGCTTTAAAGAGACAAAGGAAAATAGAACATTTGGAGATTCTTGATAACAAAGAAAGCAATACCCAATACCAGTCAACATCCTTCATCGGTAAAGTTCTAAAACCGTCCTTTCGGTGTTCAGTTTTTCAAAAACCCGACCATCATTCGGTTTCTTTATTGTTGCCTTTGTGGTCACATATGTCATGTTTGCAATATCTTGACTTAAGTTTCTGTAATCTTGTTCAAATCCCTAATGCTATTGGGTGGTTAAACTGCTTAGAAACACTAAATTTGGGGGGTAACAATTTTGTTACATTACCTTCTAGCATCAAGGAACTTTCCAAACTTAGAGAATTGAACTTGGAGCACTGTAAGCAGCTGAAATATTTCCCTGAACTTCCATCAAAAACTGTTTTGTCAAAAAGAGAAACTTTTTTTGTCTGGGGGGTGTTAAATATTTTTGATTGCCCCAGTTTGATTGTGACGGAGCGCTGTTATAGAATGGCTTTTTCTTGGATGATACAACTCCTTAAGGTGTACATGAAATCTGATCTCCAAATGGCTCAGATTGATATTGTTATTCCAAAAACTCAAATTCCAATGTGGTTCAACAAACAAAATGTCAGTAGTTCAATAAGCATGGATCCATTACCCAATATGGATGACAAGAATTTGATAGGTGTTGCTTGCTGCATAACATTTGTAGCACATGATGATCCAACTATTTTAGGAGGTAATAGATGGGGAACGGATGGAGGTTATTATATTACGTTAGGTTTTGAAAGTAACCAGCGTGGAATCTATTCTCTTAATCCTATATATCTTGAAAAAGATTTGGTCACAGTTGAGTTAGATCACTTGTTGCTAATGTTTTGCAGTAAGGCTAATTTTATCTATAAAAAAAGTTTTATAACAAAGGGATTGCGTGATATTGAATTGGTAGCCGATGTTGAGCAGCCTCCTGGTTTGCATTTGGAGATCAAAAGTTGTGGTTATCATTGGATATTTAAGGAGGATCTGGAACAATTAAACCCTCAAATGATGTATAGTGGAAATTCCTCACTTCAGCCATATTATTGA 1629 0.3573 MATENLEAIVIQQYTQNKDEIEAMTTLRAEALAQMSRLKLLMLWHLNFSGSLNFLSSELGYLCWNKYPFTCLPSRFEPDKLVELILRHSNIKKLWKGKKSLHNLMHIDLSHSKNLIMMPNFLEIPNLELLNLEGCIKLEQVDPSISILRRLSKLNLKNCTNLVSIPNNIIGLSSLKDLNLSGCPKLLNNLALKRQRKIEHLEILDNKESNTQYQSTSFIGKVLKPSFRCSVFQKPDHHSVSLLLPLWSHMSCLQYLDLSFCNLVQIPNAIGWLNCLETLNLGGNNFVTLPSSIKELSKLRELNLEHCKQLKYFPELPSKTVLSKRETFFVWGVLNIFDCPSLIVTERCYRMAFSWMIQLLKVYMKSDLQMAQIDIVIPKTQIPMWFNKQNVSSSISMDPLPNMDDKNLIGVACCITFVAHDDPTILGGNRWGTDGGYYITLGFESNQRGIYSLNPIYLEKDLVTVELDHLLLMFCSKANFIYKKSFITKGLRDIELVADVEQPPGLHLEIKSCGYHWIFKEDLEQLNPQMMYSGNSSLQPYY 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02143 542 Pfam Leucine rich repeat 253 308 IPR001611 GO:0005515
Trre7g02143 542 Pfam Leucine Rich Repeat 80 99 IPR011713 -
Trre7g02143 542 Gene3D Ribonuclease Inhibitor 17 205 IPR032675 -
Trre7g02143 542 Gene3D Ribonuclease Inhibitor 235 345 IPR032675 -
Trre7g02143 542 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 32 190 IPR044974 GO:0006952
Trre7g02143 542 Pfam C-JID domain 377 524 IPR045344 -
Trre7g02143 542 SUPERFAMILY L domain-like 26 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02143 Trre-Chr7 17020984 17022948 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g02143 34 302 WRKY Transcription Factor Family AT4G12020 35.172 4.91e-25 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02143 - - psat:127106907 642.499