Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02140 ATGACATGGAAATATGATGTATTTGTGAGCTTTAGATGTGAAGATACGCGCAATAATTTCGCTGATCACCTTTTTGGCGCATTTCATAGAAAAGGCATTGTTGCCTTCAAGGATGATACAAAGCTCAAGAAAGGGGAATATATATCATCTGAGCTTCTAAAAGCCATCGAAGGATCTCAAATTTTGATTGTTATCTTCTCAAAAAATTATGCTTCTTCCACATGGTGCTTGCAAGAACTGGCAAAAGTTGCTGATTGCTTTGAAGTACTAGGACAAACGGTGCTACCTATTTTCTATGATGTGAATCCATCTGAGGTACGGAAGCAAATCAGAGACTTTGAAAAAGCCTTTATGGAGCATGAAGAAAGATTCAAAGAAAACTTAGAAGAAGTGCTAAGATGGAGGCGAGCTCTAACACAAGTAGCCAACCTCTCTGGTTGGGATATAAAGGATAAGCCAGAATATGCAGAAATTGGAAAAATTATTAAAGAGGTAACATGCTTATTGGGTCACAATTTTTCAACTTCTCCTGGCGATATAGTTGGAATGCACTCACAAGTGGAAGAATTAGAAAAACTTCTGATTTTGGACTCCGATGATGATGTTCGAGTTGTTGGGATTTGTGGAATGGGCGGAATAGGGAAGACAACTCTTGCTACTGCTTTGTATGCTAGAATCTCTAATCAATTTGAAGCTTGCTGCTATATTGATGATGTAAGTAAAACTTATGGAGGTTATGGGCCAATTGGAGTGCAAAAGCAACTTCTTTGTCAAACTCTAAAAGAAGAAAATATTCAGATATGCAATCTTTATATGGCATCTAATTTGATTCAAACTCGGCTATGTCAAATAAAATCCCTTGTGATCCTTGATAATGTTGATCAAGTTGAACAACTGGATAAATTAGGCATGAAACGAGAATGGCTAGGCACTGGGAGCAGAATCATCATAATTTCTAGAGATTGTCATATCTTGAGAGAGCATGGAGTAGATGAAGTTTATCAAGTTCAACTCTTGGATCATAGTAACGCCATTCAATTGTTTTGTAGGAAAGCTTTTAAAAGTGATGATATCTTGAGCGGTTACACAGACTTGACAAATGATGTATTAGTATATGCCAATGGCCTTCCATTAGCAATTAAAGTGTTGGGCTCATTTTTGTATGGTCAAAATGTCTCTGAATGGAGAAGTGCATTGGAAAGAATAAGAGAGAATCCTAGGGCAGATATTATGGATGTACTCCGAGTTAGTTTTGATGGGCTAGAGGATACAGAAAAGAATATATTTCTAGATGTTGCTTGTTTCTTTGATGGAGAAACCGAGACATATGTGAAGAAAGTCTTAGATATTCGTGGATTTCATCCTGAAATTGGTTTAAGAGTTCTCTATAATAAGTCATTCATAAGCTGTGAGAATAGGATAATTTTTATGCATGATTTGCTCAAAGAACTGGGCAAAAGTATCGTTAGAGAAAAATCACCCAAAGAACCAAGAAAGTGGAATAGAATGTGGGACTACAAGGATGTCCACAATGTTATGTCAGAAAACATGGAAACAGAAAACCTCGAAGCCATAGTTCTGCAGCGTTATCCTTATAAAATTGATGAAATACAAGCAATTTCAACATTGAGGGCAGAAAGTTTAGCACAAATGAACCGCCTTAAATTGCTCATTATGCGGCATTTAAATTTCTCAGGAAGTCTCAATTTTCTTTCAAGTGAATTGGGGTTTCTATGTTGGGATAAATATCCTTTCACTTGTTTGCCATCGAGTTTTGAGCCGGATAAACTTGTTGAACTGATCATACCTCGTAGCCACATCAGGCAACTATGGGAGGGCACAAAGCCTCTTCATAATTTGACACATCTTGATCTCTCTCACTCGGAAAATCTTATTATTATGCCAAGTTTTTTGGAGATTCCAAATCTTGAGTTCCTAGATCTTGAAGGATGCATAAAACTTGTGCAGATTGATCCATCCATTGGTATCTTAAGAAGGCTTTCCCTATTAAATTTGAAAAATTGTACAAATCTTGTTAGTATTCCTAACAAAATTTTTGGTCTGAGTTCTCTTAAATCTCTAAATCTCACAGGCTGCCCAAATTTTTGGTTAGAGGGACAAAGACAAATAGAACATTTTAAGCAACCCTTCCGATTTTTTATTTTTCAAAAAAGTAGAGATCCAGTTGGTTTATTGTTGCCTTTGGTGTCTCGTCTGTCATGTTTACAGTATCTAAACCTAAGTTTCTGCAATCTTGTTCAAATCCCTAATGCTATTGGGTGGTTACACTGCTTAGAAAGATTAAATTTGGGGGTTAACAATTTTGTTACATTACCTTCCATCAAGGAACTTTTCAAACTTAGAGAATTGAACTTGGAGCACTGTAAGCAGCTGAAATATTTACTTGAACTCCCATCAAAATCTGTCTTGCCAGTAAGAGAAACATATTTTGGTACACATAGTGTTCTATTAAATATTTTTGGTTGCCCGAGTTTAACTGATATGGAAGGTTGTTATAGAATGGTTTTTTCTTGGATGATACAACTTCTTCAGGTGCACATGAAATCCGATCTCCCAATTGGTCAGATTGAGATTGTCATTCCTAAAATTCAAATTCCAATGTGGTGCAATAAACAAAATGTGGGCAGTTCAATAAGGATGGATCCATTACCCAATATGGATGACAAGAATTTGATAGGTGTTGCTTGCTGCATAACACTTATTGATTTCATAACATGA 2739 0.3625 MTWKYDVFVSFRCEDTRNNFADHLFGAFHRKGIVAFKDDTKLKKGEYISSELLKAIEGSQILIVIFSKNYASSTWCLQELAKVADCFEVLGQTVLPIFYDVNPSEVRKQIRDFEKAFMEHEERFKENLEEVLRWRRALTQVANLSGWDIKDKPEYAEIGKIIKEVTCLLGHNFSTSPGDIVGMHSQVEELEKLLILDSDDDVRVVGICGMGGIGKTTLATALYARISNQFEACCYIDDVSKTYGGYGPIGVQKQLLCQTLKEENIQICNLYMASNLIQTRLCQIKSLVILDNVDQVEQLDKLGMKREWLGTGSRIIIISRDCHILREHGVDEVYQVQLLDHSNAIQLFCRKAFKSDDILSGYTDLTNDVLVYANGLPLAIKVLGSFLYGQNVSEWRSALERIRENPRADIMDVLRVSFDGLEDTEKNIFLDVACFFDGETETYVKKVLDIRGFHPEIGLRVLYNKSFISCENRIIFMHDLLKELGKSIVREKSPKEPRKWNRMWDYKDVHNVMSENMETENLEAIVLQRYPYKIDEIQAISTLRAESLAQMNRLKLLIMRHLNFSGSLNFLSSELGFLCWDKYPFTCLPSSFEPDKLVELIIPRSHIRQLWEGTKPLHNLTHLDLSHSENLIIMPSFLEIPNLEFLDLEGCIKLVQIDPSIGILRRLSLLNLKNCTNLVSIPNKIFGLSSLKSLNLTGCPNFWLEGQRQIEHFKQPFRFFIFQKSRDPVGLLLPLVSRLSCLQYLNLSFCNLVQIPNAIGWLHCLERLNLGVNNFVTLPSIKELFKLRELNLEHCKQLKYLLELPSKSVLPVRETYFGTHSVLLNIFGCPSLTDMEGCYRMVFSWMIQLLQVHMKSDLPIGQIEIVIPKIQIPMWCNKQNVGSSIRMDPLPNMDDKNLIGVACCITLIDFIT 912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02140 912 ProSiteProfiles TIR domain profile. 3 169 IPR000157 GO:0007165
Trre7g02140 912 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 5 701 IPR044974 GO:0006952
Trre7g02140 912 SUPERFAMILY "Winged helix" DNA-binding domain 409 513 IPR036390 -
Trre7g02140 912 Pfam Leucine Rich Repeat 596 615 IPR011713 -
Trre7g02140 912 SMART till_3 4 144 IPR000157 GO:0007165
Trre7g02140 912 FunFam Disease resistance protein (TIR-NBS-LRR class) 1 170 - -
Trre7g02140 912 Pfam TIR domain 4 150 IPR000157 GO:0007165
Trre7g02140 912 PRINTS Disease resistance protein signature 204 219 - -
Trre7g02140 912 PRINTS Disease resistance protein signature 280 294 - -
Trre7g02140 912 PRINTS Disease resistance protein signature 373 387 - -
Trre7g02140 912 PRINTS Disease resistance protein signature 615 631 - -
Trre7g02140 912 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 170 431 IPR027417 -
Trre7g02140 912 Gene3D - 170 334 IPR027417 -
Trre7g02140 912 Gene3D - 338 422 IPR042197 -
Trre7g02140 912 Gene3D Ribonuclease Inhibitor 722 845 IPR032675 -
Trre7g02140 912 Gene3D Ribonuclease Inhibitor 498 715 IPR032675 -
Trre7g02140 912 Pfam NB-ARC domain 186 406 IPR002182 GO:0043531
Trre7g02140 912 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 147 IPR035897 -
Trre7g02140 912 SUPERFAMILY L domain-like 540 834 - -
Trre7g02140 912 Gene3D - 1 169 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02140 Trre-Chr7 17013510 17016748 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g02140 5 831 WRKY Transcription Factor Family AT4G12020 28.125 2.23e-83 292
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02140 - - tpra:123922646 1501.11