Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02139 ATGGCTTGTAGTAGCAACCAAAATGTTTCTTCATCTAGGATGAAATGGAAATATGATGTGTTTGTGAGCTTCAGAGGTGAAGACACACGCAAGAATTTCGCTGATCATCTTTTTGGTGCTTTTCATAGAAAAGGCATCGTTGCCTTCAAGGATGACATAAAGCTCAAGAAAGGGGAACATATATCATCTGAGCTTGTAAAAGCCATTGAAGGATCTCAAATTTTGATTGTTATCTTCTCGAGAAACTATGCTTCTTCGACATGGTGCTTGGAGGAACTAGCAAAAATTGCTGAATGCAAAGTATTAGGACGAGCTGTGCTACCTATTTTCTATGATGTGAGTCCATCTGAGGTACGAAAGCAAAGCGGAGATTTTGAAAAAGCCTTTATGGAGCATGAAGATAGATTCAAAGAAAACTTAGAGGAAGTGCAAAGATGGAGGAGAGCTCTAACACAAGTAGCCAACCTCTCTGGTTGGGATGTAAAGGATATGCCAGAATATGCAGAGATTGGAAAAATTATTAAAGAGGTAACATGCTTATTGGGTCACAAATTTTCAACTTCGCCTGACGATATAGTTGGGATGCACTCAAAAGTGGAAGAATTAGAAAAGCTTCTGATTTTGGACTCCGATGAAGATGTTCGAGTTGTTGGGAGTTGTGGAATGGGAGGAATAGGGAAGACAACTCTTGCTAATGCTTTGTATGCTAGAATCTCTAATCAATTTGAAAATTGCTGCTATATTGATGATGTAAGTAAAATTTATGGAGGTTATGGCCCAATTGGAGTGCAAAAGCAACTTCTTTGTCAAACTCTAAAAGAAGAAAATCTTCAGATATTGAATCATTCTATGGCATCTAATTTGATTAAAACTAGGCTCTGTCAAATAAAATCTCTTGTAGTTCTTGATAATGTTGATCAAGTTGAACAACTGGATAAATTGGCCATGAAACGAGAATGGCTAGGCACTGGGAGCAGAATCATCGTAATTTCTAGAGATTGTCATATCTTGAGAGAGCATGAAGTAGATGAAGTTTACAAAGTTGAACTCTTGGATCATAGTAATGCCCTTCAATTGTTTTGTAGGAAAGCTTTTAAAAGTGATGATATCATGAGTGGTTACATAGACTTGTCATATGATGTACTAAAATATGCCAATGGCCTTCCATTAGCAATTAAAGTGTTGGGCTCATTTTTGTATGGCCGAGATGTATCTGAATGGAGAAGTGCATTGGCAAGATTAAAGGAGAATCCAAGGGCAGATATTATGGATGTACTCCGTACTAGTTTTGATGGACTAGAGGATACAGAAAAGGATATATTTCTAGATATCGCTTGTTTCTTTGGTAGAGACAATGAGACAAGCGTGAAGAAATTTTTAGATATTCGTGGATTTCATCCTGAAATTGGTTTAAGAGTTCTCATTGACAAATCATTTATAACCTGTAAGAGAAGGGGTATTTATATGCATGATTTATTCAAAGAATTGGGCAAGAGCATCGTTAGAGAAAAATCACCCAATGAACCAAGAAAGTGGAGTAGGATTTGGGACTACACGGATTTCCACAATGTTATATCAGAAAACAAGGGATCAGAAAACCTTGGAGCTATAGTTGTGCGGCATTTTCCAAAATACGATGAAGAAATAGAAGCAATGACAACATTGAGGGCTGATGCTTTAGCTCAAATGGGTAGCCTTAAATTGCTCATACTGCGGAGTTTAAATTTTTCTGGAAGTCTCAATTTTCTTTCAAGTGAATTGGGGTATCTTTTGTGGGATAAATATCCTTTCACTTGTTTGCCATCAAGTTTTGAGCCGGATAAACTTGTTGAACTGATCCTACCTCATAGCAACATCAGGAAACTATGGAAAGGCACAAAGGCTCTACCCAATTTGATATATATTGATCTCTCTCACTCTAGAAATCTTATTAAGATGCCAAGTTTTTTGGATATTCCAAATCTTGAGCGGCTAGATCTCGAAGGATGTATAAAACTCATGCAGATTGATCCATCCATTGGTATCTTAAGAAGGCTTTCCCGATTAAATTTGGAAAATTGTACAAATCTAGTAAGTATTCCTAACAACATTATCGGTCTGAGCTCTCTCAAAGGTCTAAATCTCTCGGGCTGTCCAAAATTACTTAATAATCTGGCTTTAAAGAGACAAAGGAAAATAGAACATTTGGAGATTCTTGATAACAAAGAAAGCAATACCCAATACCAGTCAACATCCTTCATGGGTAAAGTTCTAAAACCGTCCTTTCGGTGTTCAGTTTTTCAAAAACCCGACCATCATTCGGTTTCTTTATTGTTGCCTTTGTGGTCACATATGTCATGTTTGCAATATCTTGACTTAAGTTTCTGTAATCTTGTTCAAATCCATAATGCTATTGGGTGGTTAAGCTGCTTAGAAACACTAAATTTGGGGGGTAACAATTTTGTTACATTACCTTCTAGCATCAAGGAACTTTCCAAACTTAGAGAATTGAACTTGGAGCACTGTAAGCAGCTGAAATATTTCCCTGAACTTCCATCAAAAACTGTTTTGTCAAAAAGAGAAACTTTTTTTGTCTGGGGGGTGTTAAATATTTTTGATTGCCCCAGTTTGATTGTGACGGAGCGCTGTTACAGAATGGCTTTTTCTTGGATGATACAACTCCTTAAGGTGTACATGAAATCTGATCTCCAAATGGCTCAGATTGATATTGTTATTCCAAAAACTCAAATTCCAATGTGGTTCAACAAACAAAATGTCAGTAGTTCAATAAGCATGGATCCATTACCCAATATGGATGACAAGAATTTGATAGGTGTTGCTTGCTGCATAACATTTGTAGCACATGATGATCCAACTATTTTGCTGCATAATATGGATGGAGGTTATTATATTACGTTAGGTTTTAAAAGTAACCAGTGTGGAATCTATTCTCTTAATCCTATATATCTTGAAAAAGATTTGGTCACAGTTGAGTTAGATCACTTGTGGCTAATGTTTTGCAGTAAGACAAATTTTATCTATAAAAAAAGTTTTATAACAAAGGGATTGCGTGATATTGAATTGGTAGCCGATGTTGAGCAGCCTCCTGGTTTGCATTTGGAGATCAAAAGTTGTGGTTATCATTGGATATATAAGGAGGATCTGGAACAATTAAACCCTCAAATGATGTACAGCGGAAATTCCTCAGTTCAGCCATATTATTGA 3204 0.3655 MACSSNQNVSSSRMKWKYDVFVSFRGEDTRKNFADHLFGAFHRKGIVAFKDDIKLKKGEHISSELVKAIEGSQILIVIFSRNYASSTWCLEELAKIAECKVLGRAVLPIFYDVSPSEVRKQSGDFEKAFMEHEDRFKENLEEVQRWRRALTQVANLSGWDVKDMPEYAEIGKIIKEVTCLLGHKFSTSPDDIVGMHSKVEELEKLLILDSDEDVRVVGSCGMGGIGKTTLANALYARISNQFENCCYIDDVSKIYGGYGPIGVQKQLLCQTLKEENLQILNHSMASNLIKTRLCQIKSLVVLDNVDQVEQLDKLAMKREWLGTGSRIIVISRDCHILREHEVDEVYKVELLDHSNALQLFCRKAFKSDDIMSGYIDLSYDVLKYANGLPLAIKVLGSFLYGRDVSEWRSALARLKENPRADIMDVLRTSFDGLEDTEKDIFLDIACFFGRDNETSVKKFLDIRGFHPEIGLRVLIDKSFITCKRRGIYMHDLFKELGKSIVREKSPNEPRKWSRIWDYTDFHNVISENKGSENLGAIVVRHFPKYDEEIEAMTTLRADALAQMGSLKLLILRSLNFSGSLNFLSSELGYLLWDKYPFTCLPSSFEPDKLVELILPHSNIRKLWKGTKALPNLIYIDLSHSRNLIKMPSFLDIPNLERLDLEGCIKLMQIDPSIGILRRLSRLNLENCTNLVSIPNNIIGLSSLKGLNLSGCPKLLNNLALKRQRKIEHLEILDNKESNTQYQSTSFMGKVLKPSFRCSVFQKPDHHSVSLLLPLWSHMSCLQYLDLSFCNLVQIHNAIGWLSCLETLNLGGNNFVTLPSSIKELSKLRELNLEHCKQLKYFPELPSKTVLSKRETFFVWGVLNIFDCPSLIVTERCYRMAFSWMIQLLKVYMKSDLQMAQIDIVIPKTQIPMWFNKQNVSSSISMDPLPNMDDKNLIGVACCITFVAHDDPTILLHNMDGGYYITLGFKSNQCGIYSLNPIYLEKDLVTVELDHLWLMFCSKTNFIYKKSFITKGLRDIELVADVEQPPGLHLEIKSCGYHWIYKEDLEQLNPQMMYSGNSSVQPYY 1067
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02139 1067 Gene3D - 350 434 IPR042197 -
Trre7g02139 1067 SUPERFAMILY "Winged helix" DNA-binding domain 421 524 IPR036390 -
Trre7g02139 1067 SUPERFAMILY L domain-like 553 870 - -
Trre7g02139 1067 Gene3D - 11 181 IPR035897 -
Trre7g02139 1067 PRINTS Disease resistance protein signature 292 306 - -
Trre7g02139 1067 PRINTS Disease resistance protein signature 216 231 - -
Trre7g02139 1067 PRINTS Disease resistance protein signature 822 838 - -
Trre7g02139 1067 PRINTS Disease resistance protein signature 385 399 - -
Trre7g02139 1067 SMART till_3 17 156 IPR000157 GO:0007165
Trre7g02139 1067 Pfam TIR domain 17 162 IPR000157 GO:0007165
Trre7g02139 1067 ProSiteProfiles TIR domain profile. 16 181 IPR000157 GO:0007165
Trre7g02139 1067 SUPERFAMILY Toll/Interleukin receptor TIR domain 10 159 IPR035897 -
Trre7g02139 1067 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 18 718 IPR044974 GO:0006952
Trre7g02139 1067 Pfam Leucine Rich Repeat 608 627 IPR011713 -
Trre7g02139 1067 Gene3D Ribonuclease Inhibitor 764 873 IPR032675 -
Trre7g02139 1067 Gene3D Ribonuclease Inhibitor 551 738 IPR032675 -
Trre7g02139 1067 Gene3D - 182 347 IPR027417 -
Trre7g02139 1067 FunFam Disease resistance protein (TIR-NBS-LRR class) 14 182 - -
Trre7g02139 1067 Pfam Leucine rich repeat 781 836 IPR001611 GO:0005515
Trre7g02139 1067 Pfam NB-ARC domain 198 419 IPR002182 GO:0043531
Trre7g02139 1067 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 444 IPR027417 -
Trre7g02139 1067 Pfam C-JID domain 905 1049 IPR045344 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02139 Trre-Chr7 16993048 16996790 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g02139 18 830 WRKY Transcription Factor Family AT4G12020 30.144 7.27e-88 309
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02139 - - tpra:123922646 1498.41