Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02136 ATGGCTTGTAGTAGCACCCAAAGTGTCTCTTCACCTAAGAGGACATGGAAATATGATGTGTTTGTAAGCTTCAGAGGTGAAGATACACGCAACAATTTCACTGATCACCTTTTTGGCGCACTCCATAAAAAAGGCGTTACTATCTTCCGGGATGATACAAAGCTCAAGAAAGGGGAAAATATATCATCTGAGCTTCTACAAGCTATTGATGGATCCCATATTTTGATTGTTATCTTCTCAAGAAATTATGCTTCTTCTACATGGTGCTTGCAAGAACTGGAAAAAATTGCTGAATGCATTGAATTACAAGGACAAATTGTTCTACCTGTTTTCTATGATGTGAGTCCATCTGAAGTACGAAAGCAAAACGGAGATTATGAAAAAGCTTTTCGGAAGCATGAAGAAAGATTCAACGAAAAATTGGAGGAAGTGCAAAGATGGAGGGTTGCCCTAACACAAGTAGCCAATCTCTCTGGTTGGGATGTAAAGGATAGGCCACAATATGCAGAGATTGCAAAAATTGTTAAAGAGGTAATGTGCATACTGGGAAATAAAACTTCAAGTTTACCTGGCGATATAGTTGGGATACAATCACGGGTGGAAGAATTAGAAAACCTTCTGATTTTGGATTCAGATGATGATGTTCGAGTTGTAGGGATTTGTGGAATGGGTGGAATAGGGAAGACAACTCTTGCAAATTCTTTGTATGCTAGAATCTCTAATCAATTTGATGCTTGCTGCTTTATTGATGATGTAAGTAAACTTTATGAAGATTATGGCCCAACTGAAGTGCAAAAGCAACTTCTTTGTCAAACTCTAAATGAAGAAAATATTCAGATATTGAATCATTTTAAGGCATCTAGTTTGATTCAAACTAGGCTATGTCAAATAAAATCCCTTGTAGTTCTGGATAATGTTGATCAAGTCGAACAACTGGATAAATTGGCCATGAAACGAGAATGGCTAGGAACAGGGAGTAGAATCATCATAATTTCTAGGAATAGCCATATCTTGAGAGTGCATGGAGTAGATGAAGTTTACAAAGTTCGACTCTTGGATGATAATGATGCCCTTCAATTGTTCTCTTGGAAAGCTTTCAAAAGTAATGCTATCATGAGTGGTTACATAGACTTGACAAATGATGTACTAAAATATGCCAATGGCCTTCCATTAGCAATTAAAGCGCTGGGCACATTTTTGTATGGTCGTGATGCCTCTGAATGGAGAAGTGCATTGGCAAGATTAAGGGAGAATCCAAGACCAGATATTATGGATGTACTCCGAATTAGTTTTGATGGACTAGAGGATACGGAAAAGGATATATTTCTCGATATTGCTTGTTTCTTTGTTGGAAACCGTGAGACATTTGTGAAGAAAATTTTAGATATCCGTGGATTTCAACCCGAAATTGGTTTAAGAGTTCTCATTGATAAATCTTTCATAACCTGTGAAGATGAAAGAATTTTTATGCATGATTTGTTCAAAGAACTTGGCAAGAGTATCGTTAGAGAAAAATCACCCAAAGAACCAAGAAAGTGGAATAGGATGTGGGACTACAAGGATGTCCATAATATTATCTCAGAAAACATGGCAACAGAAAACCTTGAAGCCATAGTTATTCAGCAGTACACACAAAATAAGGACGACATAGAAGCAATGACAACATTGAGGGCTGAAGCTTTAGCACAGATGAGTCGCCTTAAATTGCTCATGCTGTGGCATTTGAATTTCTCAGGAAGTCTAAATTTTCTTTCAAGTGAACTGGGCTATCTCTGTTGGAATAAATATCCTTTCACTTGTTTGCCATCAAGGTTTGAGCCGGATAAACTTGTTGAACTGATCCTACGTCATAGCAACATCAAGAAACTATGGAAGGGCAAAAAGTCTCTGCACAATTTGATGCATATTGATCTTTCTCATTCAAAAAATCTGATTATGATGCCAAACTTTTTGGAGATTCCGAATCTTGAGTTGCTAAATCTTGAAGGATGTATAAAACTCGAACAGGTTGATCCATCAATTAGTATATTAAGAAGGCTTTCCAAATTAAATTTGAAAAAGTGTACAAATCTAGTAAGTATTCCTAACAACATTATCGGTCTGAGCTCTCTCAAAGATCTAAATCTCTCGGGCTGTCCAAAATTACTTAATAATCTGGCTTTAAAGAGACAAAGGAAAATAGAACATTTGGAGATTCTTGATAACAAAGAAAGCAATACCCAATACCAGTCAACATCCTTCATCGGTAAAGTTCTAAAACCGTCTTTTCGGTGTTCAGTTTTTCAAAAACCCGACCATCATTCGGTTTCTTTATTGTTGCCTTTGTGGTCACATATGTCATGTTTGCAATATCTTGACTTAAGTTTCTGTAATCTTGTTCAAATCCCTAATGCTATTGGGTGGTTAAACTGCTTAGAAACACTAAATTTGGGGGGTAACAATTTTGTTACATTACCTTCTAGCATCAAGGAACTTTCCAAACTTAGAGAATTGAACTTGGAGCACTGTAAGCAGCTGAAATATTTCCCTGAACTTCCATCGAAAACTGTTTTGTCAAAAAGAGAAACTTTTTTTGTCTGGGGGGTGTTAAATATTTTTGATTGCCCCAGTTTGATTGTGACGGAGCGCTGTTACAGAATGGCTTTTTCTTGGATGATACAACTCCTTAAGGTGCACATGAAATCTGATCTCCAAATGGCTCAGATTGATATTGTTATTCCAAAAACTCAAATTCCAATGTGGTTCAACAAACAAAATGTCAGTAGTTCAATAAGCATGGATCCATTACCCAATATGGATGACAAGAATTTGATAGGTGTTGCTTGCTGCATAACATTTGTAGCACATGATGATCCAACTATTTTAGGAGGTAATAGATGGCGAACGGATGGAGGTTATTATATTACGTTAGGTTTTGAAAGTAACCAGCGTGGAATCTATTCTCTTAATCCTATATATCTTGAAAAAGATTTGGTCACAGTTGAGTTAGATCACTTGTTGCTAATGTTTTGCAGTAAGGCTAATTTTATCTATAAAAAAAGTTTTATAACAAAGGGATTGCGTGATATTGAATTGGTAGCCGATGTTGAGCAGCCTCCTGGTTTGCATTTGGAGATCAAAAGTTGTGGTTATCATTGGATATTTAAGGAGGATCTGGAACAATTAAACCCTCAAATGATGTATAGTGGAAATTCCTCACTTCAGCCATATTATTGA 3216 0.3654 MACSSTQSVSSPKRTWKYDVFVSFRGEDTRNNFTDHLFGALHKKGVTIFRDDTKLKKGENISSELLQAIDGSHILIVIFSRNYASSTWCLQELEKIAECIELQGQIVLPVFYDVSPSEVRKQNGDYEKAFRKHEERFNEKLEEVQRWRVALTQVANLSGWDVKDRPQYAEIAKIVKEVMCILGNKTSSLPGDIVGIQSRVEELENLLILDSDDDVRVVGICGMGGIGKTTLANSLYARISNQFDACCFIDDVSKLYEDYGPTEVQKQLLCQTLNEENIQILNHFKASSLIQTRLCQIKSLVVLDNVDQVEQLDKLAMKREWLGTGSRIIIISRNSHILRVHGVDEVYKVRLLDDNDALQLFSWKAFKSNAIMSGYIDLTNDVLKYANGLPLAIKALGTFLYGRDASEWRSALARLRENPRPDIMDVLRISFDGLEDTEKDIFLDIACFFVGNRETFVKKILDIRGFQPEIGLRVLIDKSFITCEDERIFMHDLFKELGKSIVREKSPKEPRKWNRMWDYKDVHNIISENMATENLEAIVIQQYTQNKDDIEAMTTLRAEALAQMSRLKLLMLWHLNFSGSLNFLSSELGYLCWNKYPFTCLPSRFEPDKLVELILRHSNIKKLWKGKKSLHNLMHIDLSHSKNLIMMPNFLEIPNLELLNLEGCIKLEQVDPSISILRRLSKLNLKKCTNLVSIPNNIIGLSSLKDLNLSGCPKLLNNLALKRQRKIEHLEILDNKESNTQYQSTSFIGKVLKPSFRCSVFQKPDHHSVSLLLPLWSHMSCLQYLDLSFCNLVQIPNAIGWLNCLETLNLGGNNFVTLPSSIKELSKLRELNLEHCKQLKYFPELPSKTVLSKRETFFVWGVLNIFDCPSLIVTERCYRMAFSWMIQLLKVHMKSDLQMAQIDIVIPKTQIPMWFNKQNVSSSISMDPLPNMDDKNLIGVACCITFVAHDDPTILGGNRWRTDGGYYITLGFESNQRGIYSLNPIYLEKDLVTVELDHLLLMFCSKANFIYKKSFITKGLRDIELVADVEQPPGLHLEIKSCGYHWIFKEDLEQLNPQMMYSGNSSLQPYY 1071
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02136 1071 Gene3D - 351 435 IPR042197 -
Trre7g02136 1071 Gene3D - 184 345 IPR027417 -
Trre7g02136 1071 FunFam Disease resistance protein (TIR-NBS-LRR class) 14 184 - -
Trre7g02136 1071 SUPERFAMILY "Winged helix" DNA-binding domain 422 525 IPR036390 -
Trre7g02136 1071 Gene3D - 12 183 IPR035897 -
Trre7g02136 1071 Pfam TIR domain 17 178 IPR000157 GO:0007165
Trre7g02136 1071 ProSiteProfiles TIR domain profile. 16 179 IPR000157 GO:0007165
Trre7g02136 1071 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 18 718 IPR044974 GO:0006952
Trre7g02136 1071 Pfam NB-ARC domain 198 418 IPR002182 GO:0043531
Trre7g02136 1071 Pfam Leucine Rich Repeat 609 628 IPR011713 -
Trre7g02136 1071 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 189 445 IPR027417 -
Trre7g02136 1071 PRINTS Disease resistance protein signature 217 232 - -
Trre7g02136 1071 PRINTS Disease resistance protein signature 823 839 - -
Trre7g02136 1071 PRINTS Disease resistance protein signature 293 307 - -
Trre7g02136 1071 PRINTS Disease resistance protein signature 386 400 - -
Trre7g02136 1071 SUPERFAMILY Toll/Interleukin receptor TIR domain 11 160 IPR035897 -
Trre7g02136 1071 SMART till_3 17 157 IPR000157 GO:0007165
Trre7g02136 1071 Pfam C-JID domain 906 1053 IPR045344 -
Trre7g02136 1071 Gene3D Ribonuclease Inhibitor 546 736 IPR032675 -
Trre7g02136 1071 Gene3D Ribonuclease Inhibitor 737 874 IPR032675 -
Trre7g02136 1071 SUPERFAMILY L domain-like 555 871 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02136 Trre-Chr7 16963001 16966689 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g02136 18 831 WRKY Transcription Factor Family AT4G12020 29.772 2.40e-87 308