Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02133 ATGGCATGTAGTAGCATCCAACCTGTCTCTTCACCTAAGATGACATGGAAATATGATGTATTTGTGAGCTTTAGAGGTGAAGATACGCGCAAAAATTTCACTGATCACCTTTTTGGCGCTTTTATTAGAAATGGCATTGTTGCCTTTCGGGATGATACAAAGCTCAAGAAAGGGGAACATATATCATCTGAGCTTCTAAAAGCCATTGAAGGATCCCATGTTTTGATTATCATCTTCTCAAGAAACTTTGCTTCTTCCACATGGTGCTTGCAGGAACTAGCAAAAATTGCTGAATGCAATGTATTAGGACAAACTGTGCTACCTATTTTCTATGATGTGAGTCCATCTGAGGTACGAAAGCAAAGCGGAGATTTTGAAAAAGCCTTTATGGAGCATGAAGAAAGATTCAAAGAAAACTTAGAGGAAGTGCAAAGATGGAGGAGAGCTCTAACACAAGTTGCCAACCTCTCTGGTTGGGATGTAAAGGATAAGCCAGAATATGCAGAAATTGGAAAAATTATTAAAGAGGTAACATGCTTATTGGGTCACAAATTTTCAACTTCACCTGACGATATAGTTGGAATGCACTCACAAGTGGAAGAATTAGAAAAACTTCTGATTTTGGACTCCAATGATGATGTTCGAGTTGTTGGGATTTGTGGAATGGGCGGAATAGGGAAGACAACTCTTGCTAATGCTTTGTATGCTAGAATCTCTAAAAAATTTGAAAATTGCTGCTATATTGATGATGTAAGTAAAATTTATGGAGGTTATGGCCCAATTGGAGTGCAAAAGCAACTTCTTTGTCAAACTCTAAAGGAAGAAAATCTTCAGATATTGAATCATTCTATGGTATCTAATCTGATTCAAACTAGGCTATGTCAAATAAAATCCCTTGTAGTTCTGGATAATGTTGATAAAGTTGAACAATTGGATAAATTGGCCATGAAACGAGAATGGCTAGGCACAGGGAGTAGAATCATCATAATTTCTAGGAATAGCCATATCTTGAGAGCACACGGAGCAGATGAAGTTTACAAAGTTCGACTCTTGGAACATAATGTTGCCCTTCAATTGTTCTCTTGGAAAGCTTTCAAAAGTGATGCTATCATAAGTGGGTACAGAGACTTGACATATGATGTACTAAAATATGCCAATGGCCTTCCATTAGCAATTAAAGCATTGGGCTCGTTTTTGTATGGTCGTGATGCCTCTGAATGGAGAAGTGCATTGGCAAGATTAAGAGAGACTCCAAGACCAGATATTATGGATGTACTCCGAATTAGTTTTGATGGACTAGAGGATACGGAAAAGGATATATTTCTAGATATTGCTTGTTTCTTTGATGCCTTAGACAATGTGACACGTGTGAAGGAAATTTTAGATTTTCGTGGATTTCATCCCGAAATTGGTTTAAGAGTTCTCATTGACAAATCATTTATAACCTGTGAGAACGGGTCTATTTATATGCATGATTTGTTCAAAGAACTTGGCAGGAGCATCGTTAGGGAAAAATCACCTAAAGAACCAAGAAAGTGGAATAGAATGTGGGACTACAGGGATTTCCACAATCTTATCTCGGCAAACATGGCATCAGAAAACCTTGAAGCTATAGTTATAGTTGTGCGGCATTTTCCAGAAATAGAAGCAAAGCCAACATTGAGGGCTGATGCTTTAGCTCAAATGAGTCGCCTTAAATTGCTCAAACTGCGGGGTTTAAATTTTTCAGGAAGTCTCAATTTTCTTTCAAATGAATCGGGGTATCTCCATTGGGATAAATATCCTTTCACTTGTTTGCCATCAAGTTTTGAGCCGGATAAACTTGTTGAACTGATCCTACCTCATAGCAACATCAGGAGACTATGGAAGGGCACAAAGCCTCTACACAATTTGAAACGTATTGATCTCTCTCACTCTAGGAATCTTATTAAGATGCCAAGTTTTTTGGAGATTCCAAATCTTGAGCGACTTGATCTTCAAGGATGTATAAAACTTGTGCAGATTGATCCATCCATTGGTATCTTACGAAGGCTTTCATATTTAAATTTGAGTTATTGTACAAATCCATAA 2070 0.3768 MACSSIQPVSSPKMTWKYDVFVSFRGEDTRKNFTDHLFGAFIRNGIVAFRDDTKLKKGEHISSELLKAIEGSHVLIIIFSRNFASSTWCLQELAKIAECNVLGQTVLPIFYDVSPSEVRKQSGDFEKAFMEHEERFKENLEEVQRWRRALTQVANLSGWDVKDKPEYAEIGKIIKEVTCLLGHKFSTSPDDIVGMHSQVEELEKLLILDSNDDVRVVGICGMGGIGKTTLANALYARISKKFENCCYIDDVSKIYGGYGPIGVQKQLLCQTLKEENLQILNHSMVSNLIQTRLCQIKSLVVLDNVDKVEQLDKLAMKREWLGTGSRIIIISRNSHILRAHGADEVYKVRLLEHNVALQLFSWKAFKSDAIISGYRDLTYDVLKYANGLPLAIKALGSFLYGRDASEWRSALARLRETPRPDIMDVLRISFDGLEDTEKDIFLDIACFFDALDNVTRVKEILDFRGFHPEIGLRVLIDKSFITCENGSIYMHDLFKELGRSIVREKSPKEPRKWNRMWDYRDFHNLISANMASENLEAIVIVVRHFPEIEAKPTLRADALAQMSRLKLLKLRGLNFSGSLNFLSNESGYLHWDKYPFTCLPSSFEPDKLVELILPHSNIRRLWKGTKPLHNLKRIDLSHSRNLIKMPSFLEIPNLERLDLQGCIKLVQIDPSIGILRRLSYLNLSYCTNP 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02133 689 Gene3D - 12 181 IPR035897 -
Trre7g02133 689 SMART till_3 17 156 IPR000157 GO:0007165
Trre7g02133 689 SUPERFAMILY L domain-like 551 686 - -
Trre7g02133 689 Gene3D - 182 348 IPR027417 -
Trre7g02133 689 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 444 IPR027417 -
Trre7g02133 689 Pfam NB-ARC domain 198 417 IPR002182 GO:0043531
Trre7g02133 689 Gene3D Ribonuclease Inhibitor 521 688 IPR032675 -
Trre7g02133 689 SMART AAA_5 213 351 IPR003593 GO:0016887
Trre7g02133 689 Gene3D - 351 434 IPR042197 -
Trre7g02133 689 FunFam Disease resistance protein (TIR-NBS-LRR class) 14 182 - -
Trre7g02133 689 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 18 687 IPR044974 GO:0006952
Trre7g02133 689 SUPERFAMILY "Winged helix" DNA-binding domain 421 525 IPR036390 -
Trre7g02133 689 PRINTS Disease resistance protein signature 385 399 - -
Trre7g02133 689 PRINTS Disease resistance protein signature 292 306 - -
Trre7g02133 689 PRINTS Disease resistance protein signature 216 231 - -
Trre7g02133 689 PRINTS Disease resistance protein signature 626 642 - -
Trre7g02133 689 Pfam Leucine Rich Repeat 607 626 IPR011713 -
Trre7g02133 689 Pfam TIR domain 17 164 IPR000157 GO:0007165
Trre7g02133 689 ProSiteProfiles TIR domain profile. 16 181 IPR000157 GO:0007165
Trre7g02133 689 SUPERFAMILY Toll/Interleukin receptor TIR domain 13 159 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02133 Trre-Chr7 16926115 16928796 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g02133 18 687 WRKY Transcription Factor Family AT4G12020 29.942 9.54e-84 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02133 - - tpra:123922646 1058.13