Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02132 ATGGCTTGTAGTAGCAACCAAAATGTTTCTTCATCTAGGATGAAATGGAAATATGATGTGTTTGTGAGCTTCAGAGGTGAAGACACACGCAAGAATTTCACTGATCATCTTTTTGGTGCTTTTCATAGAAAAGGCATTGTTGCCTTCAAGGATGACATAAAGCTCAAGAAAGGGGAACATATATCATCTGAGCTTGTAAAAGCCATTGAAGGATCTCAAATTTTGATTGTTATCTTCTCGAGAAACTATGCTTCTTCGACATGGTGCTTGGAGGAACTAGCAAAAATTGCTGAATGCAAAGTATTAGGAAGAGCTGTGCTACCTATTTTCTATGATGTGAGTCCATCTGAGGTACGAAAGCAAAGCGGAGATTTTGAAAAAGCCTTTATGGAGCATGAAGATAGATTCAAAGAAAAGTTAGAGGAAGTGCAAAGATGGAGGAGATCTCTAACACAAGTAGCCAACCTCTCTGGTTGGGATGTAAAGGATATGCCAGAATATGCAGAGATTGGAAAAATTATTAAAGAGGTAACATGCTTATTGGGTCACAAATTTTTAACTTCACCTGACGATATAGTTGGGATGCACTCACAAGTGGAAGAATTAGAAAAACTTCTGATTTTGGGCTCAGATGAAGATGTTCGAGTTGTTGGGATTTTTGGAATGGGCGGAATAGGGAAGACAACTCTTGCTCGTGCTTTGTATGCTAGAATCTCTAATCAATTTGAAGCTTGCTGCTATATTGATGATGTAAGTAAAACTTATGGAGGTTATGGCCCAATTGGAGTGCAAAATCAACTTCTTTGTCAAACTCTAAAGGAAGAAAATCTTCAGATATTGAATCATTCTATGGCATCGAATTTGATTCAAACTAGGCTATGTCAAATAAAATCCCTTGTAGTTCTGGATAATGTTGATAAAGTTGAACAATTGGATAAATTGGCCATGAAACGAGAATGGCTAGGCACAGGGAGTAGAATCATCGTAATTTCTAGAGATTGTCATATCTTAAGAGAGCATGGAGTAGATGAAGTTTACAAAGTTGAACTCTTGGATTATAGTAATGCCCTTCAGTTGTTTTGTAGGAAAGCTTTCAAAAGTGATGATATCATGAGCGGTTACATAGACTTGACATATGATGTACTAAAATATGCCAATGGCCTTCCATTAGCAATTAAAGTGTTGGGCTCATTTTTGTATGGCCGGAAGGTCTCTGAATGGAGAAGTGCATTGACAAGATTAAGAGAGAATCCAAGGGCAGATATTATGGATGTACTCCGAATTAGTTTTGATGGACTAGTGGATACAGAAAAGGATATATTTCTAGATATTGCTTGTTTCTATGATGGAGTCAATGAGACATATGTGAAGAACATTTTAGATATTCGTGGATTTCATCCCGAAATTGGCTTAAGAGTTCTCATTGATAAATCTTTCATAACCTGTGTACACCGGATAATTTATATGCACGATTTGTTCAAAGAACTTGGCAAGAGCATCGTTAGAGAAAAATCACCCAGAGAACCAAGAAAGTGGAGTAGGATTTGGGACTACACGGATTTCTACAATGTTATGTCAGAAAACATGGCATCAGAAAACCTTGAAGCTATAGTTGTGCGGCATTATCCAGAAAATGATGAAGAAATAGAAGCAATGACAACATTGAGGGCTGATGCTTTAGCTCAAATGAGTCGCCTTAAATTGCTCGAACTGCAGGGTTTATATTTTTCAGGAAGTCTCAATTTTCTTTCAAGTGAATTGGGGTATCTCCATTGGGATAAATATCCTTTCACTTGTTTGCCATCAAGTTTTGAGCCGGATAAACTTGTTGAACTGATCCTACCTCATAGCAACATCAGGAAACTATGGAAAGGCACAAAGGCTCTACCCAATTTGATATATATTGATCTCTCTCACTCTAGAAATCTTATTAAGATGCCAAGTTTTTTGGATATTCCAAATCTTGAGCGGCTAGATCTTCAAGGATGTATAAAACTCATGCAGATTGATCCATCCATTGGTATCTTACGAAGGCTTTCATATTTAAATTTGAAAAATTGTACAAATCTGGTCAGTATTCCTAACAACATTTTTGGTCTGAGTTCTCTCGAGTATCTAAATCTCTCAGGCTGTCAAAAATTACTTAATAATAAGTTGTTAAAGAGACAAAGGCAAATAGAAAATTTGGAGATTCTTGATAGGAAAGAAAGTACTACCCAATATCAATCAAAAGCATTGACAGTTTTAAAGCCGTTTTTTTGGTTTTGGAAGACATTTCAAAAACAAGATTCAGTATGCTTATTGTTGCCTTCATCGTCTCATCTGTCATGTTTACAATATCTAGACCTAAGTTTCTGCAATCTTGTTCAAGTCCCTAATGCTATTGGGTGGTTACACTGCTTAGAAAGACTAAATTTGGGGGGTAACAATTTTGTTACATTACCTTCTAGCATCAAGGAACTTTTCAAACTTAGAGAATTGAACTTGGCGCACTGTAAGAAGCTGAAATATTTACTTGAACTTCCATCAAAAACTGTTTTGCCAGTAAGAGAAACTTTTTTTGTCACGTGGGGATTATATATTTTTGATTGCCCCAGTTTGATTGAGATGGAATGCTGTTGTAAAATGGTTTTTTCTTGGATGATACAACTTCTTCAGGTGCACATGAAATCCGATCTCCCAATTGGTCGGATTGTGATTGTCATTCCTAAAATTCAAATTCCAATGTGGTTCAATAAACAAAATGAGGGCAGTTCAATAAGCATGGAACCATTTCCCAATATGGATGACAAGAATTTGATAGGTGTTGCTTGCTGCACAACATTTGTAGCACATGATGATCCAACTAGTTTAGGTACTAGAAGGAAACCTGATATTCAGTTGTGGTTAAAAAATAGACATGCTGTAAACATTCCCTATATTCCCCTACTTCTTGAAAAAGATCTGGTCACAGTTGGTTTAGATCACTTGTTGCTAATTTTTTACAGTAAGGCAGAATTTATTCACTTTGCATCACCTGGTATTGAATTGGTAGCCGATGTTAGTCAGCCTCCTGGTTTGCATTTTGAGATCAAAAGTTGTGGTTATCATTGGATATATAAGGAGGATCTGGAACAATTAAACCCTCAAATGATGTACAGCGGAAATTCCTCAGTTCAGCCATATTATTGA 3171 0.3655 MACSSNQNVSSSRMKWKYDVFVSFRGEDTRKNFTDHLFGAFHRKGIVAFKDDIKLKKGEHISSELVKAIEGSQILIVIFSRNYASSTWCLEELAKIAECKVLGRAVLPIFYDVSPSEVRKQSGDFEKAFMEHEDRFKEKLEEVQRWRRSLTQVANLSGWDVKDMPEYAEIGKIIKEVTCLLGHKFLTSPDDIVGMHSQVEELEKLLILGSDEDVRVVGIFGMGGIGKTTLARALYARISNQFEACCYIDDVSKTYGGYGPIGVQNQLLCQTLKEENLQILNHSMASNLIQTRLCQIKSLVVLDNVDKVEQLDKLAMKREWLGTGSRIIVISRDCHILREHGVDEVYKVELLDYSNALQLFCRKAFKSDDIMSGYIDLTYDVLKYANGLPLAIKVLGSFLYGRKVSEWRSALTRLRENPRADIMDVLRISFDGLVDTEKDIFLDIACFYDGVNETYVKNILDIRGFHPEIGLRVLIDKSFITCVHRIIYMHDLFKELGKSIVREKSPREPRKWSRIWDYTDFYNVMSENMASENLEAIVVRHYPENDEEIEAMTTLRADALAQMSRLKLLELQGLYFSGSLNFLSSELGYLHWDKYPFTCLPSSFEPDKLVELILPHSNIRKLWKGTKALPNLIYIDLSHSRNLIKMPSFLDIPNLERLDLQGCIKLMQIDPSIGILRRLSYLNLKNCTNLVSIPNNIFGLSSLEYLNLSGCQKLLNNKLLKRQRQIENLEILDRKESTTQYQSKALTVLKPFFWFWKTFQKQDSVCLLLPSSSHLSCLQYLDLSFCNLVQVPNAIGWLHCLERLNLGGNNFVTLPSSIKELFKLRELNLAHCKKLKYLLELPSKTVLPVRETFFVTWGLYIFDCPSLIEMECCCKMVFSWMIQLLQVHMKSDLPIGRIVIVIPKIQIPMWFNKQNEGSSISMEPFPNMDDKNLIGVACCTTFVAHDDPTSLGTRRKPDIQLWLKNRHAVNIPYIPLLLEKDLVTVGLDHLLLIFYSKAEFIHFASPGIELVADVSQPPGLHFEIKSCGYHWIYKEDLEQLNPQMMYSGNSSVQPYY 1056
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02132 1056 Gene3D Ribonuclease Inhibitor 546 751 IPR032675 -
Trre7g02132 1056 Pfam Leucine Rich Repeat 608 627 IPR011713 -
Trre7g02132 1056 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 18 715 IPR044974 GO:0006952
Trre7g02132 1056 Pfam TIR domain 17 159 IPR000157 GO:0007165
Trre7g02132 1056 Gene3D - 351 434 IPR042197 -
Trre7g02132 1056 Pfam C-JID domain 903 1038 IPR045344 -
Trre7g02132 1056 SUPERFAMILY Toll/Interleukin receptor TIR domain 10 159 IPR035897 -
Trre7g02132 1056 Gene3D - 14 181 IPR035897 -
Trre7g02132 1056 PRINTS Disease resistance protein signature 698 714 - -
Trre7g02132 1056 PRINTS Disease resistance protein signature 292 306 - -
Trre7g02132 1056 PRINTS Disease resistance protein signature 385 399 - -
Trre7g02132 1056 PRINTS Disease resistance protein signature 216 231 - -
Trre7g02132 1056 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 182 444 IPR027417 -
Trre7g02132 1056 Pfam NB-ARC domain 198 419 IPR002182 GO:0043531
Trre7g02132 1056 Gene3D - 182 344 IPR027417 -
Trre7g02132 1056 FunFam Disease resistance protein (TIR-NBS-LRR class) 14 182 - -
Trre7g02132 1056 SMART till_3 17 156 IPR000157 GO:0007165
Trre7g02132 1056 SUPERFAMILY "Winged helix" DNA-binding domain 421 524 IPR036390 -
Trre7g02132 1056 SUPERFAMILY L domain-like 553 871 - -
Trre7g02132 1056 Gene3D Ribonuclease Inhibitor 760 867 IPR032675 -
Trre7g02132 1056 ProSiteProfiles TIR domain profile. 16 181 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02132 Trre-Chr7 16907271 16911451 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g02132 18 804 WRKY Transcription Factor Family AT4G12020 30.741 1.60e-94 329
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02132 - - tpra:123922646 1495.33