Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02109 ATGATGACATTGAAGTATGATGTTTTTGTCAGCTTCAGAGGTGAAGACACACGCAACAATTTCGCTGATCATCTTTTTGCTGCCTTTCAAAGAAAAGGCATTTTTGCATTCAGGGATGATACTAAGCTTCAGAAAGGCGAATCTATAGCACCCGAACTCCTTCGTGCAATAGAAGGGTCTCAGATTTTCATTGTGGTCTTCTCAAAAAACTATGCTTCCTCAACTTGGTGCTTGCGAGAATTGGAATATATCCTTCACTGCAGTCAAGTTTATGGAAGACGTGTTCTGCCTGTTTTCTATGATGTTGATCCTTCTGAGGTGAGACATCAAAAAGGTAGTTATGGTGAAGCTTTTTTGAAACATGAACAGAGACTACAACATGACACTCTTACGGTGCAAACATGGAAGGAATCTCTTACACAAATGGGGAATATCTCTGGCTGGGATCTACGTGATAAGCCTCAAAATGCAGAGATTGAAAAGATTGTTCAAGAAATAATGAATATATTGAGTCGCAAAGTTTCGTGTCAGCTTTCAAAAGAATTAGTTGGAATGGATTCTCCTATAGAAAAAGTAACAAATCTATTACTTTTGGACTCGGTTAATGATGTTCGGGTTGTAGGAATTTGTGGGATGGGTGGAATAGGGAAGACAGCTCTTGCTACTGCTTTGTGTGGTCAAATCTCTCATCAATTTGATGCACTTTGTTTTATTGATGATCTAAGCAAAATATATAGACATGATGGTCCAATTGGTGCACAAAAACAAATCCTACACCAAACTCTTGGTGGTGAACACTTTCAGATATCCAATCTCTATGGCACGACTAATTTGTTACGGAGTAGGTTACGTCACCTACGAGCACTTATAATTCTTGACAATGTCGATAAAATTGAACAACTCGATAAGTTAGCTATGAGTCGTGAATGGTTAGGTGCAGGAAGTAGAATCATTATAATTTGTAGAGATGAGCATATCTTGAAAGAGTATGGAGTGGATATAGTTTACAAAGTTCCTTTCTTAAATAAGACTTACTCTCTTCAATTATTTTGTCGAAAAGCTTTCAAACTTGATCATATTTTGAGTAGTTATGAAGGTTTGGTTAACGGCATACTACACTATGCTGATGGCCTGCCACTAGCAATTGAAGTACTGGGTTCGTTTTTGTTTGGTCGAGATATATTTGAGTGGAAAAGTGCGTTGTCTAGATTGAGAGAAAGTCCAAACAAAGATGTCATGGATGTGTTGAGATTAAGTTTTGATGGTCTAGAGGAAACGGAAAAAGAAATATTTCTTGATATTGCTTGTTTTTTCAATTGGTGTCAGAAGGATTATGTCCAAAAAGTCCTAAATTGTTGTGGATTTCATGCTGATATTGGTTTAGGAGTTCTAATTGATAAATCGCTTCTAAGCATTTTTGGAGAAGATCAAATTGTTATGCAAAATTTGTTAGCAGAGTTGGGCCAAAAAATTGTCCAAGAAATTTCAAGCAATGAGTCAAGAAAGCATAGTCGGGTGTGGCTCCAAGAACAACTGCAAAATGTTATATTGGAGAATGTGGAAAAGAAGGTTGAAGCTATATATTTTGTTGAAGACATTGTTGAAAACCAAACAGAAAAATCGATCACGGGTGAAACATTGTCAAAAATGAGTCATCTTAGATTGCTCATATTCAAGGAAATGGTTTTTTCAGGAAACCTCAGCTGCCTCTCTAATGAGTTAAGATATGTGAAGTGGGTTAGATATCCTTTCGAGTATTTGCCAGCATGTTTTGAGCCAAATAAACTTGTTGAATTGACCTTGAAGCATAGCAGCATCAAACAACTATGGAAGGATAAGAAGTATTTGCCCAATTTGAGAAGTTTGGATCTAAGCCACTCGGTAAATCTAAGAAAGATGCCAGATTTTGGAGATATCCCAAATCTTGAGGAGCTAAATCTTAATGGTTGTATTAAGGTTGTGCAAATTGATCCATCAATCGGGGTTCTAAGAAAGCTTTATTTCTTGAAATTGAAAGATTGTAAAAATCTTGTAAGCATACCAAACAACATATTTGGTCTCACCTCGCTCAAATATCTAGATCTTTCGGGATGTCCCAAAGTGAATAAGAATCCAATTCCAAGGCAATTGAAGAACCTCGATTCAAGTGAAAGTTCGTCAGATTCCCAATCAACAACTTCCTCCTCCTTGAAATGGACCACAATTGGTTTACATTCCTTTTATGATTACCAAAGAGTTTTAGCAAGCTCTTTGTTGCCTTCTTTTCTTAGCTTATATTGTTTGAGTGAAGTTGATATCAGCTTCTGTGGTCTAAGTCAACTCCCTGATGCAATTGGATGTCTACATCAGCTTGAAAGGTTAAATATAGGAGGGAACAATTTTGTGACACTACCTAGCCTGAAGGAACTTTCCAACCTTGAATATTTAAACTTAGAGCATTGCAAGCTTTTGGAATCTTTGCCTCGTCTTCCTTTTCCTACATTTTTCGACCATATGACAAAATATAAGACTACTCTCAAGCATATGAAAAAATATTATAACAGGAAAATAGGGTTGGTCATTTTCAATTGTCCTAAATTGGGTGAGACTGAACGCTACAGTAGAATGGCATTTTCGTGGATGACACGATTCATTCAGGCAAGACAACAATCCTCCTCTGCCTCTTTTGATGATGACATTGAAATTGTTATTCCTGGAAGTGAAATACCAATATGGTTCAATAATCAGAGCGAGGGTGATTCAATAAGAATGGACCTATCTACCATTATGAATGACAATCACAATAATTGCATTGGCATTGCTTGTTGTGCAGTATTTTCCATCGAACCATATTATCCGACTACGCCAACATTTTCTTGGAGAGGCACACTAAGGTTGCAATTTTATAATAGTAGGATTGACGATTTTAGTTGGGATGACATCATTCCAGTAATTTTAGAAAGTGGTCTTATTATGGTCAAATCATATCATATGTGCCTAAAGTATATCCCTATGAAATCATTCTTTGATATTATGAAGTGGATAGACAGAACTCTCACACATCTTGATGATTTCAAAATGAAAGCTATCATTGACGAGCAGGTCCAAGGTCTGCATTTTGAGGTGCAGAATTGCGGGTATCGTTTGGTATATGAACATGATCTACCAGAGTTCAACTTAACAATGATGCTTCCAGGAAATCCGTTAGCTCAGAAGCGCAAGTTTTTGGCAATCAAAGATGAGGAGGCACAACCACCGTCATGTAGGCGTGGCAATAACTGTCGATTCTTTAGATGCTAA 3279 0.3705 MMTLKYDVFVSFRGEDTRNNFADHLFAAFQRKGIFAFRDDTKLQKGESIAPELLRAIEGSQIFIVVFSKNYASSTWCLRELEYILHCSQVYGRRVLPVFYDVDPSEVRHQKGSYGEAFLKHEQRLQHDTLTVQTWKESLTQMGNISGWDLRDKPQNAEIEKIVQEIMNILSRKVSCQLSKELVGMDSPIEKVTNLLLLDSVNDVRVVGICGMGGIGKTALATALCGQISHQFDALCFIDDLSKIYRHDGPIGAQKQILHQTLGGEHFQISNLYGTTNLLRSRLRHLRALIILDNVDKIEQLDKLAMSREWLGAGSRIIIICRDEHILKEYGVDIVYKVPFLNKTYSLQLFCRKAFKLDHILSSYEGLVNGILHYADGLPLAIEVLGSFLFGRDIFEWKSALSRLRESPNKDVMDVLRLSFDGLEETEKEIFLDIACFFNWCQKDYVQKVLNCCGFHADIGLGVLIDKSLLSIFGEDQIVMQNLLAELGQKIVQEISSNESRKHSRVWLQEQLQNVILENVEKKVEAIYFVEDIVENQTEKSITGETLSKMSHLRLLIFKEMVFSGNLSCLSNELRYVKWVRYPFEYLPACFEPNKLVELTLKHSSIKQLWKDKKYLPNLRSLDLSHSVNLRKMPDFGDIPNLEELNLNGCIKVVQIDPSIGVLRKLYFLKLKDCKNLVSIPNNIFGLTSLKYLDLSGCPKVNKNPIPRQLKNLDSSESSSDSQSTTSSSLKWTTIGLHSFYDYQRVLASSLLPSFLSLYCLSEVDISFCGLSQLPDAIGCLHQLERLNIGGNNFVTLPSLKELSNLEYLNLEHCKLLESLPRLPFPTFFDHMTKYKTTLKHMKKYYNRKIGLVIFNCPKLGETERYSRMAFSWMTRFIQARQQSSSASFDDDIEIVIPGSEIPIWFNNQSEGDSIRMDLSTIMNDNHNNCIGIACCAVFSIEPYYPTTPTFSWRGTLRLQFYNSRIDDFSWDDIIPVILESGLIMVKSYHMCLKYIPMKSFFDIMKWIDRTLTHLDDFKMKAIIDEQVQGLHFEVQNCGYRLVYEHDLPEFNLTMMLPGNPLAQKRKFLAIKDEEAQPPSCRRGNNCRFFRC 1092
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02109 1092 Gene3D Ribonuclease Inhibitor 530 735 IPR032675 -
Trre7g02109 1092 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 148 IPR035897 -
Trre7g02109 1092 Gene3D - 170 335 IPR027417 -
Trre7g02109 1092 FunFam Disease resistance protein (TIR-NBS-LRR class) 2 172 - -
Trre7g02109 1092 Pfam C-JID domain 897 1048 IPR045344 -
Trre7g02109 1092 SUPERFAMILY "Winged helix" DNA-binding domain 411 515 IPR036390 -
Trre7g02109 1092 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 164 434 IPR027417 -
Trre7g02109 1092 PRINTS Disease resistance protein signature 282 296 - -
Trre7g02109 1092 PRINTS Disease resistance protein signature 375 389 - -
Trre7g02109 1092 PRINTS Disease resistance protein signature 685 701 - -
Trre7g02109 1092 PRINTS Disease resistance protein signature 206 221 - -
Trre7g02109 1092 ProSiteProfiles TIR domain profile. 4 170 IPR000157 GO:0007165
Trre7g02109 1092 Pfam NB-ARC domain 187 410 IPR002182 GO:0043531
Trre7g02109 1092 Gene3D Ribonuclease Inhibitor 742 849 IPR032675 -
Trre7g02109 1092 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 6 708 IPR044974 GO:0006952
Trre7g02109 1092 SMART till_3 5 145 IPR000157 GO:0007165
Trre7g02109 1092 Gene3D - 340 424 IPR042197 -
Trre7g02109 1092 Gene3D - 4 169 IPR035897 -
Trre7g02109 1092 ProSiteProfiles Leucine-rich repeat profile. 783 804 IPR001611 GO:0005515
Trre7g02109 1092 SUPERFAMILY L domain-like 540 823 - -
Trre7g02109 1092 Pfam Leucine Rich Repeat 805 823 IPR001611 GO:0005515
Trre7g02109 1092 Pfam TIR domain 5 176 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02109 Trre-Chr7 16708706 16712503 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g02109 6 787 WRKY Transcription Factor Family AT4G12020 29.141 6.21e-80 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02109 - - tpra:123883787 1475.69