Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02107 ATGAGTCATCTTAAATTGCTCGAGGTGAATTTTTCAGGAAACCTTAGCTGCCTTTCTAACGAGCTAAGATATGTGGAGTGGGATAGATATCCTTTCAAGTATTTGCCATCAAGTTTTGAGCCCAATCAACTTGTTGAATTGATCTTGAAGCATAGTAGCATCAAACACCTGTGGAAAGACAAGAAGTATTTGCTCAGTTTGAGAACTTTGGATTTGAGTTACTCGAAAAATCTAAGAAAGATGCCAAATTTTGAAGGTGTCCGAAATCTTGAGCGGCTAAGTTTTGAAGGATGTGTGAAACTGGTGCAGATTGATCCATCTATTAATGTTCTAAGAAAGCTTGTTTTCTTGAATTTGAAAGATTGCAAAAATCTAGTAAGCATACCAAACAATATTTGTCTAATCTCTCTCAAATGTCTAAATCTTTCGGGGTGTCCCAAATTGTTTAAGAATCCAAGCCATTTGCGTAAAAGTGAATATGCATCAAATTCCGAATCAACAATATCATCCTTCTTGAAATGGACCAAGTTTCATTTCCATTCCTTGTATCACAGTGCACACAAAGCTTTACCTAGTTGTTTATTGAGTTCCTTGCTTAGATTATCTTGTTTGCATAAACTTGATATTAGTTTTTGTGGCCTAAGCCAACTCCCCGATGCAATTGGATGTTTAAGTTGGCTCGAAGAATTAAACCTAGGGGGAAACAATTTTGTTACATTACCTAGCATGTGTGAGCTTTCTAAACTTGTATATTTAAACTTGGAGCATTGCAAGATGTTAGAATCTTTGCCTCAACTTCCTTTTCCTATGACTATCAATCACGACCTTCGCATCAGTGATAGTGATATGACCGATTTTTGGCGGAGATTAGGATTGATCATTTTCAATTGTCCTAAATTAGGTGAGAGTGAAAGTTGCAGTAGCATGGCATTTTCATGGATGACACAATTGATTCAGGCAAGACAACAATCCTCCACTGCCTCCTTTCATGAGATCATTGATATCGTTATTCCTGGAAGTGAAATACCATTTTGGTTCGACAATAAGAGCGAGGGTGATTCAATAAGAATGGACCTATCTCCCATTATGCATGACGATGGCAACTATTTCGGTGGCTTTGCTTGTTGTGCTGGATTTTCCGTTGCACCTGATCCAACTAGAACAACAAATGCAGAGAGACCCGAAATAGAGCTATATATTTCTAATAGTAAAACTCGCTTTAAGTGGCATGTCATCATTCCAGTAATGCTTGAAAGATATCTTATTGAGGTAAAATCAAATCATATGTGCCTAATCTATTTCCCTCTTGAATCATTCTTTTATATTCTGAAGTGGATAGACGTAACTCTGAGCCATCTCGATGATTTCAATATGAAAGTTAGAGTTAAGAACAGCGAAGGTATGCATCTGCAGTTTCAGAATTGTGGGTATCATTGGGTATATAAACAAGATCATGCAACACTGCAGAAACTTCTTAGCTCGTAA 1485 0.371 MSHLKLLEVNFSGNLSCLSNELRYVEWDRYPFKYLPSSFEPNQLVELILKHSSIKHLWKDKKYLLSLRTLDLSYSKNLRKMPNFEGVRNLERLSFEGCVKLVQIDPSINVLRKLVFLNLKDCKNLVSIPNNICLISLKCLNLSGCPKLFKNPSHLRKSEYASNSESTISSFLKWTKFHFHSLYHSAHKALPSCLLSSLLRLSCLHKLDISFCGLSQLPDAIGCLSWLEELNLGGNNFVTLPSMCELSKLVYLNLEHCKMLESLPQLPFPMTINHDLRISDSDMTDFWRRLGLIIFNCPKLGESESCSSMAFSWMTQLIQARQQSSTASFHEIIDIVIPGSEIPFWFDNKSEGDSIRMDLSPIMHDDGNYFGGFACCAGFSVAPDPTRTTNAERPEIELYISNSKTRFKWHVIIPVMLERYLIEVKSNHMCLIYFPLESFFYILKWIDVTLSHLDDFNMKVRVKNSEGMHLQFQNCGYHWVYKQDHATLQKLLSS 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02107 494 Gene3D Ribonuclease Inhibitor 1 165 IPR032675 -
Trre7g02107 494 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 154 IPR044974 GO:0006952
Trre7g02107 494 Pfam C-JID domain 337 484 IPR045344 -
Trre7g02107 494 Gene3D Ribonuclease Inhibitor 182 335 IPR032675 -
Trre7g02107 494 SUPERFAMILY L domain-like 16 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02107 Trre-Chr7 16704455 16706119 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g02107 9 230 WRKY Transcription Factor Family AT4G12020 37.255 2.39e-27 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02107 - - tpra:123883787 461.07