Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02093 ATGGAGGGGACACAAGAAGAAGCACGTCTGGCAGAGCAAAGGCAATCCAATGTGTCACGGTGGCCTTCAGATTTTGTCGGAAAATTTGGATCTGTTTCTTTGGAAACTAGAGATGAGACCTTAAATAATAAAGAATCACCAAGACTTTCTAACCAAGATTTTATGTCACCTCAGAGGGCATCACAAATTCTATGGCACACCGGAATGCTATCAGAACCGATACCAAATGGTTTTTACTCGGTTGTTCCGGAGAAAAGACTCAAGAAGCATTTTGATAGCATTCCGACTTTGGATGAGCTTCAAGCTTTAGGTGGAGAGGGTTTTAGGGCTGATGTCATTGTTGTGGATGCAAAGAAAGATAGAAAGTTATCTATGTTGAAGCAACTAATTGTCACATTGGTTAAAGGGTTGAACGCAAATCTAGCTGCAATAATTAAGAAGATAGCTGTATTAGTTTCTGATTTCTATAAGCGACCGAATGTAGAAAGTCCTGCAAAAGCTGCACTCGAGGAATCCTCCCACATGTTTGAGAGTCACGGTATCCAGATGCTGGGGCAAATAAAGCATGGTTCATGCCGTCCTCGAGCCATCTTATTTAAAGTATTAGCAGATACTGTAGGTCTTGAAAGTAAGCTCATGATGGGTTTTCCAACTGATGGGGCTGCCGATTGTGTAGACTCATACAAGCATATGTCTGTGATAGTTGTGTTAGACTCTGTAGAACTGCTGGTTGATCTTATGCGCTTTCCTGGCCAACTGTTACCTCGATCAATCAAGTCAATTCTTATGACACACATTTCTGCAGCAGGAGAGAGTGATTCAGCTGAAAATGATTCTTGTGATTCACCATTAGAACCAAACAGTCCTTTATATGGGGTTTCAGAGAGTGCTGAAAAAGATGAGAATCTCCAATTCCATAGAAGATTTGAAGCATCTTCAAATGTATCAGGTCCTCCCTTGCGAAACATGATGTTACGATCAAATACCAGTTTGGACAGAAAATTAAACTTGTCTCATAGTGAACCAAACATTGCAACTTCATTTGGTCGGCGTAGTCGAAGAAAGGTCATTGCTGAACAGAGGACTGCTAGCTCAAGTCCCGAACATCCATCATTTCAAGCTCGTGGACAGTCCAAGCTTGGCGGCGACAAGACTGCATTTAGAGATTTTGCTGATGACCAGGCTACATCAAGATCCAGCTATAAGTCAGATGGTGCATCCTCATCAGAAACTCGTAGAATACGAAGAAGAAGCCTCAGTATTACACCAGAGATTGGTGATGATATTGCAAGGGCTGTGCGAGCAATGAATGAAAAACTAAAACAAAATCGTCTTCTAAAGGAACAAGGGGATGGTAGTTCTCTGTCTCAATCTCCCAGTGATAGAATTAGCAGTGCAGAGCTTCAGAAAAATCTGTCAAATTTCTGTCTTGATGGTCATCATGAAACGTCCCCCGTATTTCCGCTGCACCGTGACAATATAACTTCAAAGGCAGTGTCATTACCCTCTTCACCACATGATTATCGAGGACCAACTTCTGAGACAAGCAGGCCATCAGGATATGAATTGAGTGATGAACTGGAGTCAACTTGGAATAAAATCCTTGAATCATCGATGTCGAATAATCAACCTCTGTTACCATATGAAGAGTGGAATATTGATTTCTCAGAATTGACTGTTGGAACTCGTGTTGGGATCGGGTTCTTTGGAGAAGTTTTCCGTGGCATATGGAATGGCACAGATGTTGCGATCAAGGTTTTCCTAGAGCAAGATTTAACTGCTGAAAACATGGAAGATTTTTGCAATGAGATATCCATTCTCAGCCGACTCAGGCATCCTAATGTCATCTTATTCCTGGGTGCATGTACAAAGCCTCCGCGCTTGTCAATGGTGACTGAATATATGGAAATGGGATCTTTATTCTACTTGATTCATGTGAGCGGTCAAAAGAAGAAGCTTAGTTGGCGAAGAAGGCTAAAGATGCTGCGTGACATATGCAGGGGCTTGATGCATATACATCGAATGAAGATTATTCACCGTGATGTGAAAAGTGCGAATTGCCTTGTGGATAAGCATTGGACAGTGAAAATCTGTGATTTCGGACTTTCAAGAATAATTACAGATTCTCCCATGAGAGATTCTTCTTCAGCTGGAACACCAGAATGGATGGCTCCTGAACTGATTCGAAATGAACCATTCACTGAAAAATGTGATATCTTTAGCCTAGGGGTGATAATGTGGGAGCTCTGCACCTTGAATAGGCCGTGGGAAGGCGTACCTCCAGAGAGGGTGGTTTATACTGTTGCTAATGAGGGTTCTAGATTGGAGATTCCTGAAGGCCCACTGGGCAGGCTGATTTCAGAGTGTTGGGCAGAACCGAATGAGCGACCAAGTTGTGAGGAGATTCTGTCTCGCTTGGTGGACATCGAGTACTCAATGTCTTGA 2445 0.4258 MEGTQEEARLAEQRQSNVSRWPSDFVGKFGSVSLETRDETLNNKESPRLSNQDFMSPQRASQILWHTGMLSEPIPNGFYSVVPEKRLKKHFDSIPTLDELQALGGEGFRADVIVVDAKKDRKLSMLKQLIVTLVKGLNANLAAIIKKIAVLVSDFYKRPNVESPAKAALEESSHMFESHGIQMLGQIKHGSCRPRAILFKVLADTVGLESKLMMGFPTDGAADCVDSYKHMSVIVVLDSVELLVDLMRFPGQLLPRSIKSILMTHISAAGESDSAENDSCDSPLEPNSPLYGVSESAEKDENLQFHRRFEASSNVSGPPLRNMMLRSNTSLDRKLNLSHSEPNIATSFGRRSRRKVIAEQRTASSSPEHPSFQARGQSKLGGDKTAFRDFADDQATSRSSYKSDGASSSETRRIRRRSLSITPEIGDDIARAVRAMNEKLKQNRLLKEQGDGSSLSQSPSDRISSAELQKNLSNFCLDGHHETSPVFPLHRDNITSKAVSLPSSPHDYRGPTSETSRPSGYELSDELESTWNKILESSMSNNQPLLPYEEWNIDFSELTVGTRVGIGFFGEVFRGIWNGTDVAIKVFLEQDLTAENMEDFCNEISILSRLRHPNVILFLGACTKPPRLSMVTEYMEMGSLFYLIHVSGQKKKLSWRRRLKMLRDICRGLMHIHRMKIIHRDVKSANCLVDKHWTVKICDFGLSRIITDSPMRDSSSAGTPEWMAPELIRNEPFTEKCDIFSLGVIMWELCTLNRPWEGVPPERVVYTVANEGSRLEIPEGPLGRLISECWAEPNERPSCEEILSRLVDIEYSMS 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02093 814 MobiDBLite consensus disorder prediction 447 463 - -
Trre7g02093 814 ProSitePatterns Serine/Threonine protein kinases active-site signature. 677 689 IPR008271 GO:0004672|GO:0006468
Trre7g02093 814 ProSiteProfiles Protein kinase domain profile. 558 811 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g02093 814 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 325 806 - -
Trre7g02093 814 Coils Coil 429 449 - -
Trre7g02093 814 Pfam Ethylene-responsive protein kinase Le-CTR1 58 253 - -
Trre7g02093 814 MobiDBLite consensus disorder prediction 272 293 - -
Trre7g02093 814 MobiDBLite consensus disorder prediction 1 26 - -
Trre7g02093 814 CDD STKc_MAP3K-like 564 806 - -
Trre7g02093 814 MobiDBLite consensus disorder prediction 443 463 - -
Trre7g02093 814 MobiDBLite consensus disorder prediction 392 407 - -
Trre7g02093 814 MobiDBLite consensus disorder prediction 331 419 - -
Trre7g02093 814 MobiDBLite consensus disorder prediction 359 373 - -
Trre7g02093 814 MobiDBLite consensus disorder prediction 331 347 - -
Trre7g02093 814 SUPERFAMILY Protein kinase-like (PK-like) 532 806 IPR011009 -
Trre7g02093 814 MobiDBLite consensus disorder prediction 498 521 - -
Trre7g02093 814 Gene3D Transferase(Phosphotransferase) domain 1 637 813 - -
Trre7g02093 814 Gene3D Phosphorylase Kinase; domain 1 551 636 - -
Trre7g02093 814 FunFam Serine/threonine-protein kinase isoform 1 548 636 - -
Trre7g02093 814 Pfam Protein tyrosine and serine/threonine kinase 559 806 IPR001245 GO:0004672|GO:0006468
Trre7g02093 814 ProSitePatterns Protein kinases ATP-binding region signature. 564 585 IPR017441 GO:0005524
Trre7g02093 814 SMART serkin_6 558 807 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02093 Trre-Chr7 16588788 16600342 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g02093 1 813 MAP Kinase Kinase Kinase AT3G58640 68.689 0.0 1137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-1 Trre7g02093 PK_Tyr_Ser-Thr 6.1e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02093 - - gmx:100807193 1387.09