Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02068 ATGAGGAGAGAAATAGGGATGAGGAGCACAACCGGAGGAGAGATAGTTCAAGTAGAAGGAGGGCACATAGTTCGATCCACCGGTAAAAAAGATCGACATAGCAAGGTTTACACGTCAAAAGGACCTCGTGATCGTAGGGTTCGTCTCTCAGCACACACAGCCATCGAATTCTACGATGTTCAAGATCGCCTTGGCTACGATAGACCGAGTAAAGCAGTGGACTGGCTCATCAAGAAAGCAAAGTCTTCCATCGACAAACTCGCCAAGCTTCCTCCGTGGCATCCGATTGGCGAAAATCAAACACTAAAACCTCAAGAAGAAGAGCAGAATGCAGCTGCAAACACAACTAGTATGGTTATTGGAGAATCTAATGGTTACAATTCATCTTTCATTTCACCACATGATGTTGAAACTGATCCTATACCTTTCATTCCTACTACCTCTTCAACTTCTTCATCCATGAATTTCCAAAACTACCCTTCTGAAAACCTTGGCCTCTCTCTTCATACCTTTCAAAATCACAATGGTTTCATTCCTTGGCAATCACAACAAGCATGTGAAAATGAAAACCATGAAACTTCAAATATTGCAAACCAAAACCAAGCACTTTTTGTGAACCAATATCAAAGAATTGTGAATTGGAATAATGAAACAACCAATGAATATATAAAAAAAGTTGGATTCATGGTAAACTCAAATCCATTTCTAAGTCAAGGTTCAGAATACTCTCCAAATGAGACACTTGAGTCGAATTTTTCGCATTCGGTTAGAACATGGAATGAAATTCCTATGACTGTTTCTTCTTCAGAGATTCATCACAGGTCTCAACAAATTCATCAAGCTTCAATCTTTGGAAACAGATTTGGTTCTAATGGATTAGCAGGGTTCTGCATTGCTGATACAGTTCAAGGTGGTGAAGAGGGTCATGGAGTTTCTTCTTCTAACAACAATTGA 954 0.3973 MRREIGMRSTTGGEIVQVEGGHIVRSTGKKDRHSKVYTSKGPRDRRVRLSAHTAIEFYDVQDRLGYDRPSKAVDWLIKKAKSSIDKLAKLPPWHPIGENQTLKPQEEEQNAAANTTSMVIGESNGYNSSFISPHDVETDPIPFIPTTSSTSSSMNFQNYPSENLGLSLHTFQNHNGFIPWQSQQACENENHETSNIANQNQALFVNQYQRIVNWNNETTNEYIKKVGFMVNSNPFLSQGSEYSPNETLESNFSHSVRTWNEIPMTVSSSEIHHRSQQIHQASIFGNRFGSNGLAGFCIADTVQGGEEGHGVSSSNNN 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02068 317 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 24 294 IPR005333 GO:0003700
Trre7g02068 317 Pfam TCP family transcription factor 27 221 IPR017887 -
Trre7g02068 317 ProSiteProfiles TCP domain profile. 29 87 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02068 Trre-Chr7 16359931 16360884 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g02068 13 310 TCP Transcription Factor Family AT1G53230 39.542 4.48e-55 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Trre7g02068 TCP 5.3e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02068 - - vun:114168475 305.449