Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02065 ATGGCTCAATTGCCACCAAAAGTTCCAATTCCAAACATGACACCAACTTGGCCTGAATTTTCTCCACACCAAAAATTACCTACACTTAAAACCTTATTGTCACCAAATGCTTCAAACTTTCAAAACAATCAACAAAATCCTTCATGGGTGGACGAGTTTCTGGACTTCTCGTCTGCCAGACGAGGAGTCCACAGACGGTCCGCGAGCGACTCGGTGACTTTCATAGAGACATCAATGATGGAACATTGTCGCCGTAGAGATGGTGACAATGATTTTGAAAGATTTGATGATGAACAATTGATGTCTATGTTTGGTGTTGATGAGGTTTCGGCGAAAAATATGATGCCGCCGCCACCAGCAACAGGTGCATTGTCTTCTAACTCCAACCCTTCAACTCCTTCTGATCATAACAGCATCAATGATGACAAAGAAGAGAGAGAAGAGGAGGAAAAGCAGCAACCATTGAAGCATGAATTGGATGAAGATGAAATTAGTGAAGGCAAACAAGAAATTGCACGAATTGTCAATGATGATGATGATAATGATGATGACAACAATGCAAATAGAACAACTTTTTCAAGTCAGAAAATTACTGACCCCAAGAGGGTAAAAAGAATCTTGGCAAATAGACAATCTGCACAAAGATCAAGAGTGAGGAAGTTGCAATACATATCAGAACTTGAACGAAGTGTGTCTTCATTACAGGCTGAAGTATCAGTATTGTCACCAAGAGTTGCATATTTGGATCATCAGAGGTTACTTCTAAATGTTGATAACAGTGCTCTCAAGCAAAGAATCGCAGCACTTGCCCAAGACAAAATCTTCAAAGATGCTCATCAAGAAGCATTGAAGAGGGAGATAGAGAGGCTGAGGCAAGTTTATCACCAACAAAACAACATCAAGAATAATAATAATAATGCTACAGTTGTATCATCACCATCTCCATCATCTAAACCACGTTGTGATAATGATACTCACATTGAAAATGAACATCTTATCAATGTTTGA 1008 0.3929 MAQLPPKVPIPNMTPTWPEFSPHQKLPTLKTLLSPNASNFQNNQQNPSWVDEFLDFSSARRGVHRRSASDSVTFIETSMMEHCRRRDGDNDFERFDDEQLMSMFGVDEVSAKNMMPPPPATGALSSNSNPSTPSDHNSINDDKEEREEEEKQQPLKHELDEDEISEGKQEIARIVNDDDDNDDDNNANRTTFSSQKITDPKRVKRILANRQSAQRSRVRKLQYISELERSVSSLQAEVSVLSPRVAYLDHQRLLLNVDNSALKQRIAALAQDKIFKDAHQEALKREIERLRQVYHQQNNIKNNNNNATVVSSPSPSSKPRCDNDTHIENEHLINV 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02065 335 SMART brlzneu 197 261 IPR004827 GO:0003700|GO:0006355
Trre7g02065 335 MobiDBLite consensus disorder prediction 110 166 - -
Trre7g02065 335 MobiDBLite consensus disorder prediction 1 22 - -
Trre7g02065 335 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 204 219 IPR004827 GO:0003700|GO:0006355
Trre7g02065 335 SUPERFAMILY Leucine zipper domain 201 255 IPR046347 GO:0003700|GO:0006355
Trre7g02065 335 CDD bZIP_plant_RF2 202 252 IPR044759 GO:0003700|GO:0006355
Trre7g02065 335 MobiDBLite consensus disorder prediction 298 335 - -
Trre7g02065 335 MobiDBLite consensus disorder prediction 321 335 - -
Trre7g02065 335 Coils Coil 280 300 - -
Trre7g02065 335 MobiDBLite consensus disorder prediction 298 320 - -
Trre7g02065 335 Pfam bZIP transcription factor 201 248 IPR004827 GO:0003700|GO:0006355
Trre7g02065 335 MobiDBLite consensus disorder prediction 1 16 - -
Trre7g02065 335 MobiDBLite consensus disorder prediction 137 166 - -
Trre7g02065 335 MobiDBLite consensus disorder prediction 120 136 - -
Trre7g02065 335 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 199 251 IPR004827 GO:0003700|GO:0006355
Trre7g02065 335 PANTHER BASIC LEUCINE ZIPPER 34 1 312 - -
Trre7g02065 335 FunFam Basic leucine zipper 61 200 273 - -
Trre7g02065 335 Gene3D - 200 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02065 Trre-Chr7 16338893 16341663 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g02065 1 278 bZIP Transcription Factor Family AT3G58120 52.901 1.70e-84 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Trre7g02065 bZIP_2 3.4e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02065 - - gmx:778128 379.407