Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02062 ATGGAGTCTTATTTCTTCCACTCTGCAATTGCATCTTTTCTTCTCTTATCTTCTGCCACATCTTGTCTTTCACACCCTTCTCTTCTTGGCGTTCACCCTCTAGATGTGAAATATTATAGCTTTCAGTTCATCAAGTGCAAGGATGGATCAAAATCATTCTCTAAAGACCGTCTCAATGATAATTTCTGTGACTGCTCTGATGGCACTGATGAACCTGGAACTTCAGCTTGTCCAGCAGGAAAGTTTTATTGCAGAAACCTAGGAAGCAAGCCACAGTTTATAGTTTCTTCCCATGTTAATGATCGTTTTTGCGATTGTTGTGATGGGAGTGATGAATATGATGGAACCATTCATTGTCCCAACACGTGTGTTATGGGTGGCAATGCAGAGAACATGTATGGGAATTATAATTCAAAAGTAAGTGATCAGGGCATTTTTGCTGAAAAAGAAGTAAAAGATGGAGTGAAGTCAGAGGAATCAGTTCATAACGTCAACGGTTTGAAGCTGGCAATTATTCTACAAGTGGTTCTAGTTGTTTTTCTGGTAGTTCTCTGGAGTTTCCGTTGCCACAACAGATATAGGAGGAGGCGTTCCCGCTGA 600 0.4067 MESYFFHSAIASFLLLSSATSCLSHPSLLGVHPLDVKYYSFQFIKCKDGSKSFSKDRLNDNFCDCSDGTDEPGTSACPAGKFYCRNLGSKPQFIVSSHVNDRFCDCCDGSDEYDGTIHCPNTCVMGGNAENMYGNYNSKVSDQGIFAEKEVKDGVKSEESVHNVNGLKLAIILQVVLVVFLVVLWSFRCHNRYRRRRSR 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02062 199 Gene3D - 73 124 IPR036055 GO:0005515
Trre7g02062 199 PANTHER N-LINKED OLIGOSACCHARIDE PROCESSING 11 160 IPR039794 -
Trre7g02062 199 Pfam Glucosidase II beta subunit-like 23 139 IPR028146 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02062 Trre-Chr7 16313074 16314653 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g02062 16 150 Calmodulin-binding Proteins AT5G56360 55.147 3.53e-44 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02062 - - tpra:123907740 298.516