Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02045 ATGATGAAAGAAAATTCCGAGGGAAAATATGGATCTTCTTCTCAAAAATCGATGAAAGAGAAGGAGAAACATCTGGTGGATAAGATTCAAGGGATTTTCACAAATCTTCAGTCTGCAAGAAAGGAAAGCAGGGCTAATGACATTGTGATATGTGAGGAGCAGATGCATCAGTTGCTTCGAGAGTGGAAGGCAGAACTGGAGTCTCCAACTACCTCCTTAGCTGATGGGAGCCTTGGTTCGTTTACTGGGGAACTAGCCCAACTGTTGCAAGAAATTGAGGAGAAAGATGATGCAACAAGTCCATTTACAAGCCCTGTGCCACTGAAGACTGGTCTTCATCAAAATAACATTAGCGATAGCAATTATCCATTTTTTCAGGAGAATTGTTTTGAGAATAACCAACCACTAGATCATACTTTTAAAGGCGCTGCTTCATCTATGTTCAACAGTCCTTTAAATAACTCAGAAATGGCGCAGTTGGATTTTCATCCATTCGGTTTAAATCAAGATATGGATCACAATACTGTAGGTCACAACTCTGATTTGATTGGTCGGTTTAATTTGTATCAGGACCACAGCCTCGGGCAAGAAACAGAAATAAAAAACTCAGAGTCAACTCAATTTAGTTTTGAAGAAGGCATTGATTGTTCTCAATTTTTCGGAGATAATGACACCACAAAATTTGGGGACAATCTTATACCTAACATCCTTCCAAATATCTGCCCTCCCCCTTCTGCTTTCCTATCCCCAAAATGTGCACTGTGGGACTGTTTCAGGCCTGCTCAAGGGTTAGAATGGTGCCAAGACTACTGTAGTAGTTCTCATGAGCTTTTGGCAAATAATGAAGGTCTCCCTGGCATGACTCCAATTTTGCGACCTGGTGGCATTGATATAAAAGACGGTCCTTTGTTTGCTGCTGTTCTTGCAAAGACAATGGGAAAAGAAGTGGGCATCCCTAAGTGTGAAGGTGCCGCTTCAATGAAAGCCCCCTGGAATGCTTCTGAGTTCTTTGACATTTCTTTTCTTGAGGGTGAAACTGTTAGGGAGTGGCTGTTCTTTGACAAGCCTAGAAGGGCATTCGACAGTGGAAATAGGAAACAGAGATCACTCCCTGATTACAATGGGCGTGGTTGGCATGAATCAAGGAAGCAGGTGATGAAGGAACACGCGGGACAAAAGAGATCCTATTACATGGATCCCCAGCCTCCTAATCGTGATTGGCATTTGTACGAGTATGAGGTCAATAGCCACGATGGATGTGCATTATACAGACTAGAATTAAAGATTGTAGATAAAAAGAAAAGTCCTAAGGGAAAAGTGTCTAAGGATTCTCTTAATGATTTGGAAAACAAGATGGGAAAGCTAACAGCTGCTCCGTCGCCAGACAATGGAAAACCTGTCAAAGGAAAAGCTGATGCCAAGTCTGAGAATGTTGGCCAGCCTGCCTGA 1449 0.4237 MMKENSEGKYGSSSQKSMKEKEKHLVDKIQGIFTNLQSARKESRANDIVICEEQMHQLLREWKAELESPTTSLADGSLGSFTGELAQLLQEIEEKDDATSPFTSPVPLKTGLHQNNISDSNYPFFQENCFENNQPLDHTFKGAASSMFNSPLNNSEMAQLDFHPFGLNQDMDHNTVGHNSDLIGRFNLYQDHSLGQETEIKNSESTQFSFEEGIDCSQFFGDNDTTKFGDNLIPNILPNICPPPSAFLSPKCALWDCFRPAQGLEWCQDYCSSSHELLANNEGLPGMTPILRPGGIDIKDGPLFAAVLAKTMGKEVGIPKCEGAASMKAPWNASEFFDISFLEGETVREWLFFDKPRRAFDSGNRKQRSLPDYNGRGWHESRKQVMKEHAGQKRSYYMDPQPPNRDWHLYEYEVNSHDGCALYRLELKIVDKKKSPKGKVSKDSLNDLENKMGKLTAAPSPDNGKPVKGKADAKSENVGQPA 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02045 482 MobiDBLite consensus disorder prediction 1 21 - -
Trre7g02045 482 MobiDBLite consensus disorder prediction 434 482 - -
Trre7g02045 482 MobiDBLite consensus disorder prediction 434 449 - -
Trre7g02045 482 PANTHER TRANSCRIPTION FACTOR VOZ1 2 476 IPR039277 GO:0006355|GO:0048578
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02045 Trre-Chr7 16201054 16204371 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g02045 1 462 VOZ-9 Transcription Factor Family AT1G28520 50.429 7.12e-151 437
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF VOZ Trre7g02045 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02045 - - psat:127101646 820.076