Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02033 ATGACTAAATGCAGTGAGCTTCAAAACAATCATAGCATCACACTGGATGGAAGAAAGGATAGCTTAATTAGAACTTGTCTCACATGTGGTCATCATATCAAATGCCAAGAACAGGGAGGTGAAATTAATGACTTACCTGGATTGCCTGCTGGAGTGAAGTTTGATCCAACAGATCAAGAGATTCTTGAACATTTGGAAGCTAAGGTGAGGTCTGATATTCATAAGCTTCATCCTCTCATTGATGAGTTCATCCCTACTCTTGAAGGAGAGAATGGAATTTGTTATACTCACCCAGAGAAATTGCCAGGAGTAGGCAAAGATGGCCTGATCCGCCATTTCTTTCACCGACCATCAAAGGCATACACAACGGGAACAAGAAAAAGAAGAAAAGTACATTCAGATCATGAAGATGGTAGCGAAACACGTTGGCACAAAACAGGTAAAACAAGACCAGTTTACAACAATTCCAAGTTAAAAGGTTACAAAAAAATCCTTGTACTTTACACAAACTATGGAAAGCAAAGAAAGCCAGAGAAAACAAATTGGGTGATGCATCAATATCATCTTGGAAATGATGAAGAAGAGAAAGAAGGTGTGTTAGTTGTGTCCAAAGTTTTCTATCAAACTCAACCAAGACAATGTGGTGGTGGTGGTAATTCATTGATGAAAGACTCAAAAACTATGAAGGGTCAAAGTGGAAATGAGGTAATCAATGGTAAAACTAGTACTACTAATGGATCATTTGTTGAGTACTATCATTCAAATTTGATATCATTTGATCAAGGGAATCAAAATAAATCTAGCAATTCTCAAGTAATTTCACATTTTGAAGGTGGTTCTTTCATTCCTTGA 852 0.3709 MTKCSELQNNHSITLDGRKDSLIRTCLTCGHHIKCQEQGGEINDLPGLPAGVKFDPTDQEILEHLEAKVRSDIHKLHPLIDEFIPTLEGENGICYTHPEKLPGVGKDGLIRHFFHRPSKAYTTGTRKRRKVHSDHEDGSETRWHKTGKTRPVYNNSKLKGYKKILVLYTNYGKQRKPEKTNWVMHQYHLGNDEEEKEGVLVVSKVFYQTQPRQCGGGGNSLMKDSKTMKGQSGNEVINGKTSTTNGSFVEYYHSNLISFDQGNQNKSSNSQVISHFEGGSFIP 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02033 283 Pfam No apical meristem (NAM) protein 49 189 IPR003441 GO:0003677|GO:0006355
Trre7g02033 283 MobiDBLite consensus disorder prediction 224 240 - -
Trre7g02033 283 Gene3D NAC domain 57 212 IPR036093 GO:0003677|GO:0006355
Trre7g02033 283 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 19 237 IPR044799 GO:0003700
Trre7g02033 283 ProSiteProfiles NAC domain profile. 48 208 IPR003441 GO:0003677|GO:0006355
Trre7g02033 283 MobiDBLite consensus disorder prediction 127 147 - -
Trre7g02033 283 FunFam NAC domain-containing protein 73 57 212 - -
Trre7g02033 283 MobiDBLite consensus disorder prediction 215 240 - -
Trre7g02033 283 MobiDBLite consensus disorder prediction 122 151 - -
Trre7g02033 283 SUPERFAMILY NAC domain 43 208 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02033 Trre-Chr7 16105699 16108046 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g02033 24 216 NAC Transcription Factor Family AT4G28500 80.829 2.92e-115 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Trre7g02033 NAM 3e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02033 - - gmx:100797459 480.715