Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02029 ATGGTTTGGAAATTCTTGATTACCTTTGCTGATGTTCTGGGAATATGGCCATTTACCTTGGATGAGCTTATACAAGCTTTTCATGACTATGACCCTAGGATGTTAGGTGAGGTCCATGTTGCTCTTCTGAGATCCATTATAAAAGACATTGAAGATGTTGCAAGAACACCCACTACTGGATTAGGAGCTAACCAAAACAGTGTTATGAACTCTGGTGGGGGGCATCCACAAGTAGTTGAAGGGGCTTATGTATGGGGTTTTGATATAAGAAATTGGCAACGGCATTTAAATCCATTAACATGGCCGGAGATTTTGCGACAATTTGCATTGTCAGCTGGATTTGGGCCGCAGTTGAAGAAACAGAATATTGAGCAGGCGCATCCTAGCAGCAATGAGGGTAATGATGGTAAAGATATAATTTCTAATCTACGCAGTGGAGCTGCTGTTGAAAATGCTGTTGCTATTATGCAAGAGAAGGGATTATCTAATCCTAGAAGACATAGGCATCGTTTGACGCCTGGAACTGTTAAATATGCTGCATTTCATGTCCTGTCTCTGGAAGGAAGCAGAGGCCTCAATATATTGGAAGTTGCAGATAAGATTCAGAAATCCGGACTTCGTGATCTTACAATAAGCAAAAATCCAGAGGCTTCTGTAGCTTCTGCTTTGTCTAGAGATACAGAACTATTTGAAAGGACAGCTCCTTCAACATATTGTGTACGTCCTGTATATAGAAAGGACCCAGCTGATTCTGAAGCAATTTATTCAGCTGCCAGGGAAAGAATCAGGATATTCAAAAGTGGATTTGTGGGTGCAGAAGAAGCTAATGATGGTGAAAGGGATGAAGATTGTGAAAGTGATATGGGAAGAGATCCCGAGATTGATGATTTAGGAGCTCAACCAAATACAAAAAAGGAGGTTTCAAATTATGAGGGATTTAATGCAAACACTGTCGTGAGAAGTGGGAAAAACAATGATGAGGTTTTGCAAACTCTTGAAAGTTGCCATGAGAAAGTGGATGAGGATTTAAGATCAACTGTTGGTGAAGGTTTCAATGAACATAAAGATGTTTTTATATCTAGTAAAACTACTGTTTGCAGCAATGACGTTGCTAATCCTATTCTAAAAGGCGTGGATGTTGATGAAAACACTCTTGGTGAACCATGGGTACAAGGGCTTATGGAGGGAGAGTACTCAGATCTTAGTGTAGAGGAGCGTCTTCATGCTCTTGTTGCTTTGATTACTGTGGCAATTGAAGGAAATTCTATCCGTGTTGTGCTGGAGGAACGTCTAGAAGCCGCAAATGCTTTAAAAAAACAGATGGTGGCTGAGGCACATCTTGATAAACGGCGTATTAAAGAGGATTGTTTTGTTAAAATGCAGTCTTGCTCATATTTGAAAAACAAGAATGAACCAGCTGTTGCATTTCCATCAGTAGGGGGTAACCAATGCACATTGCATACTGCTGATGTCGAAAATGATAAGGCTTTACTCACTCCCTGTGACCGGCATGAACAGATAAATGCACTACAGGAAAATGAAAATCTTCTGCAGAGTTCCTTATTAGAAGGGAACATGCAGAGGCAAGATTGTTCTACAGGCCCGGATAATTATTCAATCCAACAATCTATATATGCTTCTGAAAGGTCAAGGTCAAATTTAAAATCATACATTGATCACTTGGCTGAACAAACTTACATGTGCAGATCATTGCCTCTTGGTTTGGATCGGAGAAGAAACCGATACTGGCAATTCACTACTTCTGCTTCTCAAAATGATCCAGGTTGTGGTAGGATTTTTGTGGAATTGCATGACGGCTGTTGGAAGCTGATTGATTCTGAAGAGGGTTTTGATGCTCTATTGGTATCATTGGACGTACGTGGGGTCAGGGAATCCCACTTGCATATGATGTTGCAAAGAATTGAAATGTCCTTCAAAGAATCTGTTAGAAGAAATGTCCAAAATGGACACACTGTCAAGAAACTCGGTACAGAAGCAGTTATAATAGCTACAGCTTCTGCTTGCATTGATGATTTGAACACATCAGTGGCGTCAACATCTTTTACGGTTCAGCTTGGAAGAAATGAAGTTGAGAACAAAGATGCTTATATGAGATATTGGGACTTTGAGAAATGGATGCGAAAGGAATGTCTAACATCTTGGGAAAAAGACAAGTTTGGGAAGAGGAGGTGCAACCAACTACTTTTCATGTGTGATTGGTGCAATCATGTCTTTTTCTTTAGAGGATCACCGTGTCCATGCGATAGAATAGCTTTGAGTACTAGTCAGGGGAACATTTCATCCTCTTCTCCAATGAGGATGAGATTGCTCAAAATCATCTTGTCAGTTGTTGAGGCAACCCTTCCTCAAGAAGCTCTGCAACCTTTTTGGACAGAGAGGTACAGAAAGTCTTGGGGTTCAAAACTGGAAGTTTCCTCATCAGCTGAAGACATTCTGCAGATGTTGACTGCATTGGAAGGTGCTATAAAAAGGGAGTATTTGGCTTCAGACTATGAAACTACCAGTGAGCTGTTAGGTTCAGTTTGCTCGTCCAGTTGTCTCCCTAATGATACCATTGGTGGTGGAAGGATACCTGTGCTTCCATGGGTGCCATATACAACTGCTGCTGTGGCTCTGAGGCTCATGGAACTTGATACATGCGCCTTTTACACCTCACAGCAGAAGCTAGAGTCCAAGGATAAAAAAGTTGGAATTGTTGTGAAGCTTCCATCAAAATATGCTGCTGCCAAAAATTCCTACGATGCTGGTGCAATTGAAACTTCATTTCAGGCTAAGCATACTGTAGAGAACCGGCGTGCTCTTGGGGGTGTTCTTGGTACTGGCCTCGAGAGCTGCAGCAGACGCCAAAGGACTCGTCAAGACCGCAGCCATTCTCGTGATCAAAGATCACAGGGAAGAGTTGTTAGTTCCAGATCAACTTCCAGAAAGAGAAGCACTACCAGTACATCTAACAGTAGGAAAAAAGATAGCAGGATAGGAAAATTACTTGGATGGAAAGGGACACCAAACATTCGTGGTCGGAGAAGCATCAGAAGCAGGCAGAAACCTGCAGCCAAGATGGATGTGATCATAGAGGAGATGAATGAAGGTGAAAGGGAAACAGAAGCCAATGCGCGGAATGCTAGTAGTTTGGAAAGATCAGACTATGAAGGCGAACTTTATCGAGCAACAGATGAGTATCATCATCTGGTAGATAATAATAATAATATTAATGTTGATGGATGTAAGGATGGATTTAGTGGGAAATCTGAGAACTTAATAGAACAAAGCCATTATAATGTGGATGATGAGAACGATGTGAATATGGATGACGATAATAGCGAGGAAGATGAGGAAGATGGGCAAGTCGATCTTAATACCGAAGATTATATAATTGGAGGGGACTCAGATACAGGGTACAACAGAGAAGAAAATGAAGAACACGAGGATCCAGATGGAGATGGTTCTACATCATCAGATTGCAGTGATTAA 3492 0.4138 MVWKFLITFADVLGIWPFTLDELIQAFHDYDPRMLGEVHVALLRSIIKDIEDVARTPTTGLGANQNSVMNSGGGHPQVVEGAYVWGFDIRNWQRHLNPLTWPEILRQFALSAGFGPQLKKQNIEQAHPSSNEGNDGKDIISNLRSGAAVENAVAIMQEKGLSNPRRHRHRLTPGTVKYAAFHVLSLEGSRGLNILEVADKIQKSGLRDLTISKNPEASVASALSRDTELFERTAPSTYCVRPVYRKDPADSEAIYSAARERIRIFKSGFVGAEEANDGERDEDCESDMGRDPEIDDLGAQPNTKKEVSNYEGFNANTVVRSGKNNDEVLQTLESCHEKVDEDLRSTVGEGFNEHKDVFISSKTTVCSNDVANPILKGVDVDENTLGEPWVQGLMEGEYSDLSVEERLHALVALITVAIEGNSIRVVLEERLEAANALKKQMVAEAHLDKRRIKEDCFVKMQSCSYLKNKNEPAVAFPSVGGNQCTLHTADVENDKALLTPCDRHEQINALQENENLLQSSLLEGNMQRQDCSTGPDNYSIQQSIYASERSRSNLKSYIDHLAEQTYMCRSLPLGLDRRRNRYWQFTTSASQNDPGCGRIFVELHDGCWKLIDSEEGFDALLVSLDVRGVRESHLHMMLQRIEMSFKESVRRNVQNGHTVKKLGTEAVIIATASACIDDLNTSVASTSFTVQLGRNEVENKDAYMRYWDFEKWMRKECLTSWEKDKFGKRRCNQLLFMCDWCNHVFFFRGSPCPCDRIALSTSQGNISSSSPMRMRLLKIILSVVEATLPQEALQPFWTERYRKSWGSKLEVSSSAEDILQMLTALEGAIKREYLASDYETTSELLGSVCSSSCLPNDTIGGGRIPVLPWVPYTTAAVALRLMELDTCAFYTSQQKLESKDKKVGIVVKLPSKYAAAKNSYDAGAIETSFQAKHTVENRRALGGVLGTGLESCSRRQRTRQDRSHSRDQRSQGRVVSSRSTSRKRSTTSTSNSRKKDSRIGKLLGWKGTPNIRGRRSIRSRQKPAAKMDVIIEEMNEGERETEANARNASSLERSDYEGELYRATDEYHHLVDNNNNINVDGCKDGFSGKSENLIEQSHYNVDDENDVNMDDDNSEEDEEDGQVDLNTEDYIIGGDSDTGYNREENEEHEDPDGDGSTSSDCSD 1163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02029 1163 MobiDBLite consensus disorder prediction 1105 1125 - -
Trre7g02029 1163 MobiDBLite consensus disorder prediction 1098 1163 - -
Trre7g02029 1163 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 1 1163 IPR044977 GO:0006357
Trre7g02029 1163 MobiDBLite consensus disorder prediction 972 987 - -
Trre7g02029 1163 ProSiteProfiles HARE-type HTH domain profile. 174 243 IPR007759 GO:0006355
Trre7g02029 1163 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 387 428 IPR028942 -
Trre7g02029 1163 MobiDBLite consensus disorder prediction 283 300 - -
Trre7g02029 1163 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 569 641 IPR028941 -
Trre7g02029 1163 SMART testlast3 1 52 IPR018501 -
Trre7g02029 1163 ProSiteProfiles DDT domain profile. 1 52 IPR018501 -
Trre7g02029 1163 Pfam DDT domain 1 49 IPR018501 -
Trre7g02029 1163 MobiDBLite consensus disorder prediction 954 971 - -
Trre7g02029 1163 MobiDBLite consensus disorder prediction 947 1024 - -
Trre7g02029 1163 Pfam HB1, ASXL, restriction endonuclease HTH domain 174 241 IPR007759 GO:0006355
Trre7g02029 1163 MobiDBLite consensus disorder prediction 274 304 - -
Trre7g02029 1163 Coils Coil 424 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02029 Trre-Chr7 16050498 16058794 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g02029 1 930 Homeobox Transcription Factor Family AT5G44180 49.587 0.0 858
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Trre7g02029 WSD 2.2e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02029 - - gmx:100797480 1443.33