Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02026 ATGGGTGTAGACTACTACAAAATCTTGCAGGTTGATAAGAATGCCAATGATGAAGAATTGAAGAAAGCTTATAGGAAACTTGCCATGAAATGGCACCCTGATAAAAATCCAACCAACAAAAAAGAAGCAGAAGCTAAGTTCAAACAAATTTCTGAAGCTTATGATGTACTTAGTGATCCTGAAAAGAGAGGTATCTATGATCAATATGGAGAAGAGGGTTTAAAGGGTCAAGTTCCTCCACCTGATGCTGCTGGTGGTGGTGGTGGAACTAGTTTCTATTCCACAGGAGATACCCCTGGATCGTTTCGGTTTAATCCGAGGGTTTCGGTTTAA 333 0.4024 MGVDYYKILQVDKNANDEELKKAYRKLAMKWHPDKNPTNKKEAEAKFKQISEAYDVLSDPEKRGIYDQYGEEGLKGQVPPPDAAGGGGGTSFYSTGDTPGSFRFNPRVSV 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02026 110 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Trre7g02026 110 PRINTS DnaJ domain signature 62 81 IPR001623 -
Trre7g02026 110 PRINTS DnaJ domain signature 24 39 IPR001623 -
Trre7g02026 110 PRINTS DnaJ domain signature 42 62 IPR001623 -
Trre7g02026 110 PRINTS DnaJ domain signature 6 24 IPR001623 -
Trre7g02026 110 Gene3D DnaJ domain 3 106 IPR036869 -
Trre7g02026 110 CDD DnaJ 4 59 IPR001623 -
Trre7g02026 110 MobiDBLite consensus disorder prediction 91 105 - -
Trre7g02026 110 FunFam DnaJ subfamily B member 13 3 109 - -
Trre7g02026 110 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Trre7g02026 110 PANTHER DNAJ HOMOLOG SUBFAMILY B 3 93 - -
Trre7g02026 110 SMART dnaj_3 3 62 IPR001623 -
Trre7g02026 110 Pfam DnaJ domain 4 67 IPR001623 -
Trre7g02026 110 MobiDBLite consensus disorder prediction 71 110 - -
Trre7g02026 110 SUPERFAMILY Chaperone J-domain 3 92 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02026 Trre-Chr7 16042753 16043335 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g02026 5 74 C2H2 Transcription Factor Family AT1G74250 36.486 1.65e-11 57.8