Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02019 ATGTCATCGGAGAAGGAGAGAGAGACTCAGGTTTACCTGGCAAAGCTTGCTGAGCAAGCTGAGAGATATGAAGAAATGGTTGAGTGCATGAAGACAGTAGCAAAACTTGATGTTGAGCTAACTGTGGAAGAGAGGAATCTCCTCTCAGTAGGATATAAAAATGTCATTGGTGCAAGGAGAGCTTCTTGGAGAATTATGTCTTCAATTGAACAGAAAGAAGAGTCTAAGGGAAATGAGAACAATGTGAAACTGATCAAGAGTTATTGCCAAAAGGTTGAGGAGGAACTATCCAAAATTTGCAGTGACATTCTCACAATTATTGACCAACATCTCATTCCTTCTTCCACCACAGGAGAAGCTACTGTTTTCTACTACAAGATGAAAGGTGACTATTATCGATATCTTGCTGAGTTCAAGAGTGAACAAGATAGGAAAGAGGCAGCTGAGCAGTCACTTAAGGCATATGAGGCCGCTTCAGCATCTGCAAGCACAGATCTTCCATCAACACATCCAATCCGTCTTGGACTTGCACTCAACTTCTCTGTCTTCTACTATGAGATACTGAATTCTCCTGAAAGGGCCTGTCATTTGGCTAAACAAGCTTTCGATGAGGCAATTGCGGATTTAGATACCTTGAGTGAAGAGTCATACAAGGACAGTACTTTGATCATGCAATTGTTGAGAGACAACCTTACACTTTGGACCTCCGATTTACCTGAGGATGGAGGTGAAGAAATCAAAACAGAAGAAGCCAAACCAGTTGAACCAGAGCACTGA 777 0.4196 MSSEKERETQVYLAKLAEQAERYEEMVECMKTVAKLDVELTVEERNLLSVGYKNVIGARRASWRIMSSIEQKEESKGNENNVKLIKSYCQKVEEELSKICSDILTIIDQHLIPSSTTGEATVFYYKMKGDYYRYLAEFKSEQDRKEAAEQSLKAYEAASASASTDLPSTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIADLDTLSEESYKDSTLIMQLLRDNLTLWTSDLPEDGGEEIKTEEAKPVEPEH 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02019 258 Coils Coil 13 33 - -
Trre7g02019 258 Gene3D - 1 247 IPR036815 -
Trre7g02019 258 MobiDBLite consensus disorder prediction 240 258 - -
Trre7g02019 258 SUPERFAMILY 14-3-3 protein 6 237 IPR036815 -
Trre7g02019 258 SMART 1433_4 7 248 IPR023410 -
Trre7g02019 258 PRINTS 14-3-3 protein zeta signature 181 207 IPR000308 -
Trre7g02019 258 PRINTS 14-3-3 protein zeta signature 39 68 IPR000308 -
Trre7g02019 258 PRINTS 14-3-3 protein zeta signature 154 180 IPR000308 -
Trre7g02019 258 PRINTS 14-3-3 protein zeta signature 88 112 IPR000308 -
Trre7g02019 258 PRINTS 14-3-3 protein zeta signature 119 141 IPR000308 -
Trre7g02019 258 PRINTS 14-3-3 protein zeta signature 208 237 IPR000308 -
Trre7g02019 258 MobiDBLite consensus disorder prediction 238 258 - -
Trre7g02019 258 FunFam 14-3-3 protein epsilon 1 248 - -
Trre7g02019 258 Pfam 14-3-3 protein 13 235 IPR023410 -
Trre7g02019 258 PIRSF 14-3-3 1 247 IPR000308 -
Trre7g02019 258 Coils Coil 138 158 - -
Trre7g02019 258 PANTHER 14-3-3 PROTEIN 7 237 IPR000308 -
Trre7g02019 258 ProSitePatterns 14-3-3 proteins signature 2. 217 236 IPR023409 -
Trre7g02019 258 ProSitePatterns 14-3-3 proteins signature 1. 45 55 IPR023409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02019 Trre-Chr7 15998233 16002530 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g02019 2 252 14-3-3 family AT1G26480 86.111 1.01e-162 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02019 K06630 - gmx:100798385 470.314
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g02019 7 15998233 16002530 Trre7g02019 7 15998233 16002530 ECH
Trre7g02019 7 15998233 16002530 Trre9g02869 9 36634170 36637517 PCT