Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02017 ATGGCTACTTTGTTTTCCCTCGCAATTGCATTGCCCAAATTCAAGGTTATGGCTGAAGCTGATTCATTATTCCCTTCTTTTCTTCCCAAAGATGTCAACACAATCAAAGACTCATTCGCTCGAACTCTTGCTACGCGGATTCAGAGACTTCCCGTTAGGTTCTCTGAAAATCCTATCATGAGTAGTTGTGTGAAGCCGTTGATACAGAACAAGGCAAATCCAGTTGTCCTTTTACACGGTTTTGACAGTTCATGCTTAGAATGGAGATACACATATCCATTGCTAGAAGAAGCTGGTTTTGAGACATGGGCTTTTGACATTCTTGGTTGGGGTTTTTCTGATCTAGAGAAACTTCCTTCATGTGATGTGGTATCAAAGCGCGAACACTTTTATCAGTTTTGGAAATCCTACATTAAAAAGCCGATGATATTGGTTGGGCCAAGCCTTGGCTCTGCTGTTGCCATTGATTTTGCAATCAATTATCCAGAAGCTGTGGAAAAGCTTGTTTTAATTGATGCTAGTGTATATGCAGAAGGGACAGGAAACTTAGCAACTTTACCTAAAGCAGTAGCCTATGCTGGGGTTTATTTGTTAAAGAGCATCCCGTTACGCATATATGCAAACTATTTGTGCTTCAGTAACATATCTTTCGATACCAACCTTGATTGGACTAATATTGGCCGCTTGCATTGTTTATTTCCTTGGTGGGAGGACGCCGCGGTTGATTTTATGATTAGTGGTGGCTACAATGTTGCTTCCCAAATAAAAATGGTAAAGCAGAAAACACTCATAATTTGGGGGGAGAATGACCGCATAATCAGCAATAAGCTTGCTGTGCAACTGCACTGTGAATTACCAGATGCAATTATAAGACAAATACCCGATTGTGGTCACCTTCCTCATGTTGAAAGACCAGATTCTGTTGTGAAATTAATGGTGGAATTTGTTCAGAAGGATACCAAGAAAGTAGTAAATCAATGTGTTCCATCATTATGA 996 0.4016 MATLFSLAIALPKFKVMAEADSLFPSFLPKDVNTIKDSFARTLATRIQRLPVRFSENPIMSSCVKPLIQNKANPVVLLHGFDSSCLEWRYTYPLLEEAGFETWAFDILGWGFSDLEKLPSCDVVSKREHFYQFWKSYIKKPMILVGPSLGSAVAIDFAINYPEAVEKLVLIDASVYAEGTGNLATLPKAVAYAGVYLLKSIPLRIYANYLCFSNISFDTNLDWTNIGRLHCLFPWWEDAAVDFMISGGYNVASQIKMVKQKTLIIWGENDRIISNKLAVQLHCELPDAIIRQIPDCGHLPHVERPDSVVKLMVEFVQKDTKKVVNQCVPSL 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02017 331 Pfam Alpha/beta hydrolase family 75 310 IPR000073 -
Trre7g02017 331 Gene3D alpha/beta hydrolase 65 325 IPR029058 -
Trre7g02017 331 PRINTS Alpha/beta hydrolase fold signature 158 171 IPR000073 -
Trre7g02017 331 PRINTS Alpha/beta hydrolase fold signature 144 157 IPR000073 -
Trre7g02017 331 PRINTS Alpha/beta hydrolase fold signature 262 276 IPR000073 -
Trre7g02017 331 PRINTS Alpha/beta hydrolase fold signature 99 114 IPR000073 -
Trre7g02017 331 PRINTS Epoxide hydrolase signature 99 114 IPR000639 GO:0003824
Trre7g02017 331 PRINTS Epoxide hydrolase signature 79 97 IPR000639 GO:0003824
Trre7g02017 331 PRINTS Epoxide hydrolase signature 293 315 IPR000639 GO:0003824
Trre7g02017 331 PRINTS Epoxide hydrolase signature 158 171 IPR000639 GO:0003824
Trre7g02017 331 SUPERFAMILY alpha/beta-Hydrolases 72 317 IPR029058 -
Trre7g02017 331 PANTHER HYDROLASE 17 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02017 Trre-Chr7 15984199 15987549 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g02017 69 325 Miscellaneous Gene Families AT1G52750 24.476 3.81e-10 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02017 - - mtr:11443399 593.964
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g02017 7 15984199 15987549 Trre7g02017 7 15984199 15987549 ECH
Trre7g02017 7 15984199 15987549 Trre9g02889 9 36766340 36769542 PCT