Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02015 ATGGATTCGCAGCACCAAACTCCACCATCGCAAACCCGTGATCCTTCATCAACTTCCATTATGCTACCCTTCGTCTCGTTCATAGTCATTGCCGCTTTGGTTTTGGTTCCTTCAGCATCACCATCCTTAAAAAATACCATGTCAGTTATTCACCAAGTCCCTGAAGGCCATGTGGGGGTATATTGGAGAGGAGGTGCGCTTCTGAAAACAATAACAGAGCCAGGTTTCCATATGAAGATGCCTTTCTTAACTCAGTTTGAGCCTGTTCAAGTGACACTTCAAACAGACGAGGTGACAGATATACCGTGCGGTACCAAAGGAGGTGTTATGATTACTTTTGGGAAGATTGAGGTTGTTAACCGATTGCATAAAGAATCTGTCTATGAGACATTGCTCAACTATGGTGTACATTATGACAAGACATGGATATATGACAAGATTCATCATGAGATTAATCAGTTCTGCAGCTCTCATAGTCTTCAACAAGTATATATCGATGTGTTTGATCAGATTGACGAAAAGATGAAGGATGCTCTTCAAGTTGACTGTACCCGTTATGCTCCAGGCATTGAGATCATTGGTGTCCGTGTCACAAAGCCAAATATTCCAGAAAACATAAGCCACAACTATGAGCAGATGGAAGAGGAGCGTACTAAGGTCTTAATCGCTATTGAGAAACAGAAAGTATCCGAGAAGGAGGCAGAGACTATGAAGAAGATGGCTATTAGTGAGGCTGAGAAAAATGCCAATGTTAGCAAGATCCTTATGGAACAAAAGTTGTTGGAAAAAGATAGTGCAAGAAAACAGGAAGAAATTGAGAATGCAATGTATCTAGCACGTGAGAAGAGTCTGGCTGATGCAGATTTCTACCGTGTAACAAGGGAAGCTGAAGCAAACAGGTTGAAACTTACCCCTGAATTTCTTGAGCTAAAATTTATCGAATCCATTGCTAATAATACAAAGATTTTCTTCGGAGACAAGATTCCAAATATGATTTTGGACCAAAGGCTGCTCGGAAACTTCCTTGTTGAAGAAGTTTCTAGAGGGGAAGCTCCAAAGACGAAAGCAGATATCTAA 1077 0.4104 MDSQHQTPPSQTRDPSSTSIMLPFVSFIVIAALVLVPSASPSLKNTMSVIHQVPEGHVGVYWRGGALLKTITEPGFHMKMPFLTQFEPVQVTLQTDEVTDIPCGTKGGVMITFGKIEVVNRLHKESVYETLLNYGVHYDKTWIYDKIHHEINQFCSSHSLQQVYIDVFDQIDEKMKDALQVDCTRYAPGIEIIGVRVTKPNIPENISHNYEQMEEERTKVLIAIEKQKVSEKEAETMKKMAISEAEKNANVSKILMEQKLLEKDSARKQEEIENAMYLAREKSLADADFYRVTREAEANRLKLTPEFLELKFIESIANNTKIFFGDKIPNMILDQRLLGNFLVEEVSRGEAPKTKADI 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02015 358 Gene3D Band 7 domain 77 215 IPR036013 -
Trre7g02015 358 PANTHER ERLIN (ER LIPID RAFT ASSOCIATED PROTEIN) HOMOLOG 17 344 IPR033294 GO:0005783|GO:0031625
Trre7g02015 358 CDD SPFH_like_u3 48 335 IPR033294 GO:0005783|GO:0031625
Trre7g02015 358 SUPERFAMILY Band 7/SPFH domain 80 217 IPR036013 -
Trre7g02015 358 SMART PHB_4 48 214 IPR001107 -
Trre7g02015 358 Pfam SPFH domain / Band 7 family 52 234 IPR001107 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02015 Trre-Chr7 15978400 15981827 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02015 K23341 - gmx:100797312 602.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g02015 7 15978400 15981827 Trre7g02015 7 15978400 15981827 ECH