Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02009 ATGTGTGGAATTGCGTTGACAGTCTCAGGCATTCAAATCAACATCTCATCTCTTCCATTCGATTCAACATCTCCAAATCGCCAATCCGAAAATTTGGTGATTTCTTTAGATGATCTGAAAAAAGCTCTGCGGAGAAGAGGTCCTGATAGTTTGGGTGTAAAGAAAGTTAATCTGCCACACAATGATGGTAGTAATGGTGAACTTTGTTTCATTGGTGCAACTTTGCAGCTTAGAGGAACTCTTCCTCTTGTTCAACCTTTAGTCGATGCTTCTCGAAACATTCTTCTTTATAACGGCGAGATTTTTGGGGGACTTCAACTTGCTAGTGATTGCAACGATGCCGAATTTCTCTTGCAGACGCTCGGAAATTGTTGCTCCTGTGGTTCTTGTTTGACTGGTTACTGTATTAACTGTGGGAAAGGTTCTGTCATAGATGTTCTTTCTACGATTAAGGGACCATGGGCTATCGTTTATTGGCAGGATAGTTCAAGGACCCTTTGGTTTGGCCGAGATGCATTTGGACGAAGGAGCCTTCTTGTTCACTGGCCTACAAAAGACGATTCAACTTTTCTTCTTTCTTCTGTATCGCCAGTTTCTCCAGATCAGCAAGCCTCTGAAAATGAAGCTCATAATGGAGTAGAACCTCTTAGTTACTGGGAAGAGTTACCATGTGGAATATATAGTATGCACGGGGATGCTTCAAATTCAAACGGATTTCTGGTTGGAGAAGTCCAGATACATGAATATACAAACTCAATATTAAATGAACTTATCAAGTGGGAGAGAATTTCAATTGAACCAAGCTCTGAAAACCTGCAGACATCTCGACATAAGCTTTCTAGGATGCAACAAGATCTGCATTCAATTTCTTTAGAGTCAGTTCCACACGAAGCAGGCTCAATTGAGACTGAAATTCCAACGCAAGCTCATATGTTGCTAAATGTTTTAAGGGAATCTGTGATACGGCGTACGTCATTGTATACTATTTATCAGGCAGCGATATGTGGTATCAGACAAGAGAAATTTGTTCCTGTTGCAGTTCTTTTCTCTGGTGGGCTGGATTCTATGATACTTTCTGCATTATTGGATCAATGTCTGGATCCCAGTTATGAAATTGATCTACTTACTGTAAGCTTTGATGGCGAGTTAGCTCCTGATAGAAAATCTGCCAAGGCAGGGTTGAAAGAACTAAAAAGAGTTGCACCATCCAGAAGGTGGAGACTCGTTGAGATTGATGCTGACTTGTCAGACTTGGTGTTTGAAACTAGTCATGTTATGTCACTCATAACTCCTGCCAACACCTACATGGACCTTAATATTGGACTAGCTTTATGGCTCGCTTCTGGTGGTGATGGATGGGTGTCTGATGCAGATGATAATGATGACACTCATGCACGGATTAAGTACAAGTCCAATGCAAGGATTCTCCTTGTTGGCTCTGGTGCTGATGAACAGTGTGCTGGTTATGGGAGACATAGAACAAGTTTTAGACAAGGAAGTTGGCTGAGGCTACACGAGGAAATGAAACTCGACATGCAAAGAATTTGGAAAAGAAATTTAGGGAGAGATGATAGATGTATTGCTGATAACGGAAAGGAGGCTAGATTCCCGTTCTTGGATGAGGATGTTATAAGGGTTTTACTCAACATTCCATTGTGGGAGGTTGCCAACCTTGAACAACCTAGCGGCATCGGTGATAAAAAGATTTTAAGAGAGGTTGCTGAATTGCTTGGTTTATATGAAGCAGCAGTTCTTCCCAAACGAGCAATACAGTTCGGATCTAGAATTGCGAGGGAATCAAATCGGAAGAATTTTGGAAGTAATCGAGCAGCAAATCAGGTGTCTGCAGGCAGTGTAAGGATTTGTAGGAAATCAAATTTTGCTTGA 1887 0.4144 MCGIALTVSGIQINISSLPFDSTSPNRQSENLVISLDDLKKALRRRGPDSLGVKKVNLPHNDGSNGELCFIGATLQLRGTLPLVQPLVDASRNILLYNGEIFGGLQLASDCNDAEFLLQTLGNCCSCGSCLTGYCINCGKGSVIDVLSTIKGPWAIVYWQDSSRTLWFGRDAFGRRSLLVHWPTKDDSTFLLSSVSPVSPDQQASENEAHNGVEPLSYWEELPCGIYSMHGDASNSNGFLVGEVQIHEYTNSILNELIKWERISIEPSSENLQTSRHKLSRMQQDLHSISLESVPHEAGSIETEIPTQAHMLLNVLRESVIRRTSLYTIYQAAICGIRQEKFVPVAVLFSGGLDSMILSALLDQCLDPSYEIDLLTVSFDGELAPDRKSAKAGLKELKRVAPSRRWRLVEIDADLSDLVFETSHVMSLITPANTYMDLNIGLALWLASGGDGWVSDADDNDDTHARIKYKSNARILLVGSGADEQCAGYGRHRTSFRQGSWLRLHEEMKLDMQRIWKRNLGRDDRCIADNGKEARFPFLDEDVIRVLLNIPLWEVANLEQPSGIGDKKILREVAELLGLYEAAVLPKRAIQFGSRIARESNRKNFGSNRAANQVSAGSVRICRKSNFA 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02009 628 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 38 194 IPR029055 -
Trre7g02009 628 CDD Asn_Synthase_B_C 315 593 IPR001962 GO:0004066|GO:0006529
Trre7g02009 628 Gene3D HUPs 301 623 IPR014729 -
Trre7g02009 628 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 22 213 IPR029055 -
Trre7g02009 628 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 2 233 IPR017932 -
Trre7g02009 628 Pfam Asparagine synthase 339 397 IPR001962 GO:0004066|GO:0006529
Trre7g02009 628 Pfam Asparagine synthase 500 594 IPR001962 GO:0004066|GO:0006529
Trre7g02009 628 Pfam Glutamine amidotransferase domain 85 194 IPR017932 -
Trre7g02009 628 CDD Gn_AT_II_novel 1 227 - -
Trre7g02009 628 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 339 613 - -
Trre7g02009 628 PANTHER ASPARAGINE SYNTHETASE DOMAIN-CONTAINING PROTEIN 1 1 613 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02009 Trre-Chr7 15947511 15954639 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02009 - - gmx:100801355 1009.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g02009 7 15947511 15954639 Trre7g02009 7 15947511 15954639 ECH