Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01993 ATGAAGCTACGGCTTCAAATCTTTCTCATTTCTCTTCTCCTCGTGTTACTCTTCCCATTTTCTTCTTCATCAAAACCCAATAACCCACTCCTTGGAATCTCACCCCAAGATGAAAAATATTTCAAGTCTTCCGATGTAATTAGATGTAAAGATGGATCCGCAAATTTCAACAAAGATCAGCTCAATGACGATTTCTGTGACTGCCCCGATGGCACCGATGAGCCTGGTACATCGGCATGTCCGCATGGAAAATTTTATTGTCGAAATGCTGGGCATTCCCCTGTGTATCTGTTTTCGTCTAGAGTGAATGATGGAATTTGCGATTGCTGTGATGGAAGTGATGAATATGATGGTAAAGCAAAGTGCCCAAATACCTGCTGGGAGGCTGGGAAAGTTGCTCGAGATAAGCTGAAAAAAAAGATTGCCACATATCAAGAGGGTGTCAAAGTGAGAAAGCAAGCAATTGAACAAGCACATTTAGCTCTGGAGAAGGATGCGGCAGAGCTTTCAAAATTGAAAAAAGAAGAAAGTATACTTAAAGGGGTTGTGAAACAGCTAAAAGATCATAAAGAACAAATAGACAAGGCAGAGGAGAAGGAGCGCTTACAGAAGGAAAAAGAAGAGAAGCAGAAGAAGGAGGCCGAGGAGAAGGCTAATGAAAAAAATAATAAAGCCGATGAAGAAGATAACGGACTTGAAAATGAAGCTGAAAAGCATTCACACGTTGACGATGATTCTGCGGCAAGTAACCATGAGAAAATTGAAGTTCAAGAGGATTCTCCGGTTTATCAGGATGAAGCTGAGGAAAACTTAGCCGACACACTTGATAATATTGTTGAAGCCACTGGAAGTGAAGGATCCTTGCTTAATAAAGCGGAAGAGAATGCAAAAGAATCCGAGAGAGAACCTGCCGTTGAATCTGAAACTGATTTGAAGACTGGAAAGCCAGAGTCTTCTGAAGAAGTCATCAATAAGGAGAAAGATGTATCGGATAATCCTGATGGATTATCAAAGGAAGAATTGGGTAGACTTGTTGCTTCTCGTTGGACAGGAGAAGATGTTGGTAAGAAAAGTGCTGAAGCTGACACTGCATTAGACAATGAGGATCAGGAAGATACTTCACACGGGACAAATATAGAAGAAGATGAAGGATATGCTTCTGACACTGACGATGACAACCACAAATATGATGAAGATGTAAATGATGATGAATTTCAAGAGGATGAGCACGACGACCTTAGTTCCTCATACAAATCTGACGTTGAGACTGAAACAGACTTTTCAGATGTTAGCACAACAGACGATCCTTCTTGGTTAGAGAAAATACAGAAATCTGTGTGGAATATGTTTCAAGCCGTTAATATATTCCAGACACCAGTGAACCAGTCAGATGCTGCTCGTATACGCAAGGAATATGACGAATCAAGTACCAAGTTGTCTAAAATAGAGTCTAAAATATCAAGCCTGACACAAAAGCAAAAACTTGATTTTGGTCCAGCAAAGGAGTTTTATTCATTCTATGATCGTTGCTTTGAGAGCAAGCAGAACAAGTACATTTACAAAGTCTGTCCCTATAAGCAGGCTACTCAGGAGGAGGGCCATTCCACCACTCGTTTGGGTCGCTGGGACAAATTTGAGGATTCATACAAAGTAATGGTGTTTTCTAATGGTGATAAATGCTGGAACGGTCCTGATAGGAGTTTGAAGGTCAAACTTAAATGCGGATTGACAAATGAGATTACTGATGTAGATGAACCAAGCCGTTGCGAGTACGTAGCTTTACTAGCTACCCCGGCCCTTTGTCAGGAAGAAAAGCTGAAGGAGTTACAACACAAGCTAGACTTACTGAATTCAGAAATAACGGAAAGCCATGATGAGTTGTGA 1884 0.4092 MKLRLQIFLISLLLVLLFPFSSSSKPNNPLLGISPQDEKYFKSSDVIRCKDGSANFNKDQLNDDFCDCPDGTDEPGTSACPHGKFYCRNAGHSPVYLFSSRVNDGICDCCDGSDEYDGKAKCPNTCWEAGKVARDKLKKKIATYQEGVKVRKQAIEQAHLALEKDAAELSKLKKEESILKGVVKQLKDHKEQIDKAEEKERLQKEKEEKQKKEAEEKANEKNNKADEEDNGLENEAEKHSHVDDDSAASNHEKIEVQEDSPVYQDEAEENLADTLDNIVEATGSEGSLLNKAEENAKESEREPAVESETDLKTGKPESSEEVINKEKDVSDNPDGLSKEELGRLVASRWTGEDVGKKSAEADTALDNEDQEDTSHGTNIEEDEGYASDTDDDNHKYDEDVNDDEFQEDEHDDLSSSYKSDVETETDFSDVSTTDDPSWLEKIQKSVWNMFQAVNIFQTPVNQSDAARIRKEYDESSTKLSKIESKISSLTQKQKLDFGPAKEFYSFYDRCFESKQNKYIYKVCPYKQATQEEGHSTTRLGRWDKFEDSYKVMVFSNGDKCWNGPDRSLKVKLKCGLTNEITDVDEPSRCEYVALLATPALCQEEKLKELQHKLDLLNSEITESHDEL 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01993 627 SUPERFAMILY Mannose 6-phosphate receptor domain 512 601 IPR009011 -
Trre7g01993 627 Coils Coil 599 626 - -
Trre7g01993 627 MobiDBLite consensus disorder prediction 411 425 - -
Trre7g01993 627 MobiDBLite consensus disorder prediction 291 338 - -
Trre7g01993 627 PANTHER N-LINKED OLIGOSACCHARIDE PROCESSING 10 627 IPR039794 -
Trre7g01993 627 MobiDBLite consensus disorder prediction 395 410 - -
Trre7g01993 627 MobiDBLite consensus disorder prediction 353 394 - -
Trre7g01993 627 Coils Coil 465 485 - -
Trre7g01993 627 MobiDBLite consensus disorder prediction 186 435 - -
Trre7g01993 627 ProSiteProfiles MRH domain profile. 508 603 IPR044865 -
Trre7g01993 627 MobiDBLite consensus disorder prediction 186 260 - -
Trre7g01993 627 Pfam Glucosidase II beta subunit-like 25 174 IPR028146 -
Trre7g01993 627 Gene3D - 503 601 IPR009011 -
Trre7g01993 627 Coils Coil 152 235 - -
Trre7g01993 627 Pfam Glucosidase II beta subunit-like protein 469 626 IPR036607 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01993 Trre-Chr7 15812314 15822548 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g01993 21 627 Calmodulin-binding Proteins AT5G56360 58.880 0.0 628
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01993 K08288 - gmx:100807083 870.537
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g01993 7 15812314 15822548 Trre7g01993 7 15812314 15822548 ECH