Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01971 ATGGCTAATTCAGTAACCATGCACAAAGTAATCTCAATTATTTTCATCTTAATCACTCTTTTCACATCAAAAGCACTAGCTGATTGTGAAAGCGAATCTTCAAACAAATGCAACAACAAAGAAAAAGCTCTGCCACTAAAAATAATATCAATATTTGCAATATTATTAACTAGCATGATTGGTGTGAGTTTACCCTTGGTGTCGCGTTCGATCCCGGCCTTAAGTCCGGATCGAGATCTCTTCGTAATCGTGAAGTGTTTTGCAGCCGGTATCATTCTTGGGACTGGATTCATGCATGTACTTCCTGATTCGTACGACATGCTATGGTCGGATTGTTTGGAGGAGAAACCATGGCACGAGTTTCCGTTTTCGGGACTTGTGGCCATGTTTTCTGCTTTGATCACAATGATGGTGGATTCTTTGGCTACTAGTTATTATAGTGGGAAGCGTACCAAGAGTGGTGTTATAATTCCACATGGACATGGTGGTGATCAAGAGATGGGTGATGTTAATGTTGGTCATTCACATGGTCACCATCACATGCATAACGAGGTCAAAATCGAAGACGCAGCGTCACAACTTCTACGTTATCGTGTAGTTGCCATGGTATTGGAACTTGGAATTGTTGTTCATTCAGTGGTGATAGGACTTTCCATGGGAGCCTCCAACAACACTTGCTCATTAAAAGGTCTTGTGGCTGCCCTTTGCTTCCATCAAATGTTCGAAGGCATGGGTCTTGGTGGCTGCATTCTCCAAGCAGAGTACAAGTGGTTAAAAAAGACCATCATGGTATTCTTCTTCTCAATTACAACACCACTTGGAATTGCATTAGGAATTGCAATGTCATCTAGTTACAAAGAGAACAGTCCAAAAGCACTTATTACAGTTGGATTGCTTAATGGATCATCTGCTGGTCTTTTAATCTACATGGCTTTGGTTGATTTGCTTGCTTCTGATTTCATGAGTAAGAGGATGCAGGGTAGTATTAAGCTTCAATTAAAATCTTACATTGCGGTATTTATTGGTGCTGGTGGCATGTCTCTCATGGCTAAATGGGCTTAA 1062 0.4096 MANSVTMHKVISIIFILITLFTSKALADCESESSNKCNNKEKALPLKIISIFAILLTSMIGVSLPLVSRSIPALSPDRDLFVIVKCFAAGIILGTGFMHVLPDSYDMLWSDCLEEKPWHEFPFSGLVAMFSALITMMVDSLATSYYSGKRTKSGVIIPHGHGGDQEMGDVNVGHSHGHHHMHNEVKIEDAASQLLRYRVVAMVLELGIVVHSVVIGLSMGASNNTCSLKGLVAALCFHQMFEGMGLGGCILQAEYKWLKKTIMVFFFSITTPLGIALGIAMSSSYKENSPKALITVGLLNGSSAGLLIYMALVDLLASDFMSKRMQGSIKLQLKSYIAVFIGAGGMSLMAKWA 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01971 353 PANTHER ZINC/IRON TRANSPORTER 43 350 - -
Trre7g01971 353 Pfam ZIP Zinc transporter 46 350 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Trre7g01971 353 NCBIfam ZIP zinc/iron transport family 29 353 IPR004698 GO:0005385|GO:0016020|GO:0071577
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01971 Trre-Chr7 15625498 15628006 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g01971 23 353 Inorganic Solute Cotransporters AT1G31260 63.501 2.85e-154 436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01971 K14709 - gmx:100795511 538.495