Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01962 ATGGCGAGAGGATTGAAGGTGCTATCAGCCCTTGATTCAGCAAAAACACAATATTACCATTTCAAAGCTATCATCATAGCAGGAATGGGACTTTTCTCTGACTCCTACGACCTCTTCTCTATAACTCTAATCACAAAGATGCTAGGAAGAATATACTACTCCGATAGTGACGAAATCCGTCAAGTCAACCCTATCGTTGTCTCGGCCCTCGTCTCCGTTGCACTCCTAGGAACCGCAATCGGTCAACTCCTATTCGGTCGCCTAGGAGACCTAAAAGGTCGGCGCCACGTCTACGGTATGGCCTTATTGTTGATGTTAATAAGTTCTTTAGCTTCTGGCTTCTCCATTTGTACAACAAAAAGAGCTTGTGTTTTCCTCTCACTTGCTTTCTTTAGATTCTTCTTAGGACTTGGAATTGGTGGTGATTATCCTTTATCTTCTACAATTATGTCTGAGTTTGCTAATAAAAGGACAAGAGGGTCTTTTATAGCTGCTGTTTTTTCTATGCAAGGGTTTGGTATATTAGCTAGTGCTACGGTTACTATGGTGGTTTGCTCCATATTTCGCCGCGCTTCGAAGCCGACTTCGGCTTACGACGTGCCGCCGGAGGCCGATGTTGCATGGAGGTTAATACTGATGATTGGTTCTGTTCCGGCTGCCTTGACTTACTATTGGCGTATGATGATGCCAGAAACTGCCAGGTATACAGCTTTAGTGGAACAAAATGTACTGCAAGCTGCAAAGGACATGGAAAAAGTATTAGATGTTGCAATGAGCCAAATAGCCGAAGAAGATCCATTATCACCAACCAATAATGCTGCTGTATATCCACTTCTTTCAAGAGAATTCTTGCGTCGACACGGTCGCGATCTTTTCGCATGTTCTGCTAATTGGTTTCTATTGGACATAGTGTTCTACAGTCAAGTTCTATTCCAAAGTGAAATATACAAACGATACCTCAAACACAAAGGCGAACAAGATGTGTATCAAGAGGCTTTTCATCTCGCAAGAATCCAAGCCATTCTTGCTGTTTGTTCGACAATTCCTGGCTACTTCTTCACTGTCTACTTCATTGATCGTATAGGACGGGTTAAGATCCAAATGATAGGTTTTTTCTTCATGGCAGTGTCATTTTTTGCTATAGGGTTTCCGTATTACTCTCATTGGACTATTGGTGATAACCAAGATAATAAAGGGTTCATGGTTCTATATGGTCTTGCTTTCTTCTTTGCAAATTTTGGACCTAACACCACCACTTTTATTGTTCCGGCCGAACTCTTTCCGGCTAGGTTTCGGTCAACATGTCATGGTATTTCTGGAGCTGTTGGCAAGGTTGGTGCGATCATTGGATCTGTTGGATTTTTATGGGCTTCACATAAAGAGGAGGAGGATGGATATCCAAAGGGAATTGGAATGAAAGCATCCCTTATCATACTTGGAGGGGTGTGCATAGTGGGAATGTTTGTTACTTACTTTTTCACCAAGGAAACCATGGGAAGGTCTTTGGAAGAGAATGAAGTTGAGCAATCTCATCATGCTGAAGAATGTAACAATCTTTGA 1560 0.4218 MARGLKVLSALDSAKTQYYHFKAIIIAGMGLFSDSYDLFSITLITKMLGRIYYSDSDEIRQVNPIVVSALVSVALLGTAIGQLLFGRLGDLKGRRHVYGMALLLMLISSLASGFSICTTKRACVFLSLAFFRFFLGLGIGGDYPLSSTIMSEFANKRTRGSFIAAVFSMQGFGILASATVTMVVCSIFRRASKPTSAYDVPPEADVAWRLILMIGSVPAALTYYWRMMMPETARYTALVEQNVLQAAKDMEKVLDVAMSQIAEEDPLSPTNNAAVYPLLSREFLRRHGRDLFACSANWFLLDIVFYSQVLFQSEIYKRYLKHKGEQDVYQEAFHLARIQAILAVCSTIPGYFFTVYFIDRIGRVKIQMIGFFFMAVSFFAIGFPYYSHWTIGDNQDNKGFMVLYGLAFFFANFGPNTTTFIVPAELFPARFRSTCHGISGAVGKVGAIIGSVGFLWASHKEEEDGYPKGIGMKASLIILGGVCIVGMFVTYFFTKETMGRSLEENEVEQSHHAEECNNL 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01962 519 CDD MFS_PhT 24 497 - -
Trre7g01962 519 ProSitePatterns Sugar transport proteins signature 2. 134 159 IPR005829 GO:0016020|GO:0022857|GO:0055085
Trre7g01962 519 ProSiteProfiles Major facilitator superfamily (MFS) profile. 23 498 IPR020846 GO:0022857
Trre7g01962 519 Pfam Sugar (and other) transporter 25 506 IPR005828 GO:0016020|GO:0022857|GO:0055085
Trre7g01962 519 SUPERFAMILY MFS general substrate transporter 11 506 IPR036259 -
Trre7g01962 519 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 21 504 - -
Trre7g01962 519 Gene3D MFS general substrate transporter like domains 19 519 IPR036259 -
Trre7g01962 519 FunFam Inorganic phosphate transporter 1-6 19 518 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01962 Trre-Chr7 15502063 15505108 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g01962 5 508 Inorganic Solute Cotransporters AT1G76430 62.913 0.0 663
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01962 K08176 - gmx:100797683 789.26