Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01895 ATGGATGATTACAGAAAAGGGTCATCATCGTTATCTTACTACAATATTCTTGGTGTTAGTTCTGATTCTTCTATTGATGAAATAAGGCGTGCCTATAGAAAACTTGCAATGCAATGGCATCCAGATAGGTGGACAAGAACACCTTCCTTATTAAGTGAAGCCAAGTGTAATTTTCAGAAAATTCAAGAAGCTTATTCAGTGTTATCTGATCCCAAGAAAAGAACTATGTATGATGCTGGCTTGTATGATCCTCAAGAGGAAGATGAGGAATTTTCTGATTTTGTGGATGAAATGGTATCCCTTATGGCTGAAGTTAGGCGAGAGGAGAAGGTTTATGGTTTGGAGGAGTTGCAGGCCATGTTTATGGAAATGGCAGAAGGATTTGAGTCTCCTCCCATGTATTATGGGACAACATCGATAATTAATGAATCCTCATGTGCTAACAGAGGAAGTGTTTTGACTCAATAG 468 0.3846 MDDYRKGSSSLSYYNILGVSSDSSIDEIRRAYRKLAMQWHPDRWTRTPSLLSEAKCNFQKIQEAYSVLSDPKKRTMYDAGLYDPQEEDEEFSDFVDEMVSLMAEVRREEKVYGLEELQAMFMEMAEGFESPPMYYGTTSIINESSCANRGSVLTQ 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01895 155 CDD DnaJ 13 70 IPR001623 -
Trre7g01895 155 ProSitePatterns Nt-dnaJ domain signature. 58 77 IPR018253 -
Trre7g01895 155 PRINTS DnaJ domain signature 14 32 IPR001623 -
Trre7g01895 155 PRINTS DnaJ domain signature 53 73 IPR001623 -
Trre7g01895 155 PRINTS DnaJ domain signature 32 47 IPR001623 -
Trre7g01895 155 Gene3D DnaJ domain 5 104 IPR036869 -
Trre7g01895 155 SUPERFAMILY Chaperone J-domain 9 84 IPR036869 -
Trre7g01895 155 ProSiteProfiles dnaJ domain profile. 12 81 IPR001623 -
Trre7g01895 155 Pfam DnaJ domain 13 78 IPR001623 -
Trre7g01895 155 PANTHER PUTATIVE, EXPRESSED-RELATED 8 130 - -
Trre7g01895 155 SMART dnaj_3 11 73 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01895 Trre-Chr7 14860427 14862147 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g01895 13 79 C2H2 Transcription Factor Family AT1G74250 50.000 2.63e-16 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01895 - - tpra:123907280 269.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g01895 7 14860427 14862147 Trre7g01895 7 14860427 14862147 ECH