Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01883 ATGAGGAAAACAAGGTCCTTTTCCTTTCAATTCTTAGCAATAACATGTATTTTCTTGCTTCACTTTCAATCCATAATTCATGCACAAGACCATATAGCAACTTCAGAATTTGAAGCATTAGGCCTAACAACAGAACCAAAAAGAGAAACACTAGAAATCATCATCGGCGGAGGCGGCGGCAGTTCTTCCCCTGCTCCTTCCCCTGAACCTAACTGTCCTCCTCCTCAACCCCCACCACATCCTCCTCCTTCACCTCCGCCGTGCCCCACCATTCCCCCCCGACTAGAAAGGGCCCGCAAAACACTTCTCAAATTCGCTAAAACTGTCAAGCCAAATTCGATCACTGCAACATGGACTGAAAAAGAAAAAGATCCATGTAAGTATAAGGGAATCCTTTGTGGTGACTACCCAACGGATAAACAACGTGCAGTCGCCGGATTAGACTTAAACCAAGGAAGACTTGCAGGTAAAACCTGTGACAATATACCATTAACCGGTCTCTTAGACGAATTAATAGAGTTAACATTCTTCCATGTAAACTCCAACAATTTCTCAGATAATATCCCACCACAAATCCTTAAATTCCCTTATTTCTACGAACTTGACCTTAGTAACAACAATTTTGTCGGCGAGTTTCCGACCGTAGTTATTCAATCCACAAATCTAGTTTTTGTAGACCTCAGGTTCAACAATCTACAAGGTCCTATTCCATCACAACTATTTACTAGAGATCTTGACGTAATTTTTATCAACAACAACAAATTCACCGGAAATTTACCTGCGAATTTCGGGTCTACCCCTGCAAGGTACTTAACATTTGCACGCAATCAATTAACAGGTGAAATTCCTAAAAGTATCGGCGACGCGTCGAAAACTTTAACTGAAGTTCTTTTTCTGGGGAATAAATTTGAAGGGTGTTTACCATTTGAAATTGGGTATCTTAAAAAAGCAACAGTTTTTGATGTTAGTGATAATTCATTAACTGGGCCTATTCCAGCTTCATTTGGTTGTTTGGAAAAGATTCAGTTTTTGAATTTGGCAAAAAACAAATTCTATGGTACTGTTCCTGAAAGTGTTTGTGTTCTACCTGGGATAAAAAACAATGGAAATTTATCTTTGTCGGATAATTATTTCACTGCAATTGATCCAGCATGTTGGATTTTGTTGAAATCTAAGGTATTGGATGTTAGTAACAATTGTATTCCTGGTCTTCCAAATCAAAGATCAAAGAAAGATTGTTATGATTTTCAATGTAAAGTGAAGCCATGTTCGAATCATCAGAGTTTGAGTTATGTTCCTTGTAAGACACGTTGGGGTGCTAAACAAGACACTGCTCCTGTTTCTCAAGAAATGGCTACAGAGCCTGTTACTTACAAGTCTCTCAAACCTCATCATCGGTTGAGAATGTGA 1410 0.3908 MRKTRSFSFQFLAITCIFLLHFQSIIHAQDHIATSEFEALGLTTEPKRETLEIIIGGGGGSSSPAPSPEPNCPPPQPPPHPPPSPPPCPTIPPRLERARKTLLKFAKTVKPNSITATWTEKEKDPCKYKGILCGDYPTDKQRAVAGLDLNQGRLAGKTCDNIPLTGLLDELIELTFFHVNSNNFSDNIPPQILKFPYFYELDLSNNNFVGEFPTVVIQSTNLVFVDLRFNNLQGPIPSQLFTRDLDVIFINNNKFTGNLPANFGSTPARYLTFARNQLTGEIPKSIGDASKTLTEVLFLGNKFEGCLPFEIGYLKKATVFDVSDNSLTGPIPASFGCLEKIQFLNLAKNKFYGTVPESVCVLPGIKNNGNLSLSDNYFTAIDPACWILLKSKVLDVSNNCIPGLPNQRSKKDCYDFQCKVKPCSNHQSLSYVPCKTRWGAKQDTAPVSQEMATEPVTYKSLKPHHRLRM 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01883 469 Gene3D Ribonuclease Inhibitor 269 432 IPR032675 -
Trre7g01883 469 MobiDBLite consensus disorder prediction 54 93 - -
Trre7g01883 469 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 93 443 - -
Trre7g01883 469 MobiDBLite consensus disorder prediction 66 93 - -
Trre7g01883 469 Pfam Leucine rich repeat N-terminal domain 98 133 IPR013210 -
Trre7g01883 469 SUPERFAMILY L domain-like 108 401 - -
Trre7g01883 469 Gene3D Ribonuclease Inhibitor 96 268 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01883 Trre-Chr7 14706358 14707767 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g01883 93 424 Trihelix Transcription Factor Family AT1G12040 41.964 1.68e-76 252
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01883 - - psat:127108214 620.928