Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01882 ATGGCTTTATCAAAACAACATTTAGTTTCATTTTCAATCACCTTTCTTCTTTGTTTCAATTTGGTAAATTCCCAAATCCTTGGTCCAATATTATCCCCATTAATCCCTTTAATCCCTGACCTATTAAATTTCTTGGACCAAAGATTAGCTATAGTTTTCCCAATAATTCAAGCCTTTAAAAACACAATAACCTCTGACCCTTTAGGAATAACATCAACATGGGAAGGTCCGGATATATGCAACTACACCGGCTTCTACTGCGATAACCCGCCTGATAATCTCACGGCCATCACTGTCGCCTCCATAGATTTCAACGGTTTTCATCTCTCCGCTCCATCTCTCGATGATTTCATCGATCAACTACCTGACTTGGCTATTTTTCATGCTAACTCCAATGATTTTTCCGGCACCATTTCGCCAAAAATTGCTTCACTCAAATATTTATACGAGCTTGATCTTAGTAACAATCTTCTCTCTGGAACATTTCCCAAGTCAATCCTAAATATGCCAACACTTTCTTTCTTAGACATTAGGTACAATCTCTTCACAGGAACAGTTCCTCAACAAATTTTCACACAAACATATTTGGATGCAATTTTCCTTAACAATAACAATTTCCTTCAAACACTTCCCAACAATTTAGGTCAAACAACAGCTTCTTACATTACTTTCGCTAATAACAAATTCACCGGTCCAATTCCTCCTAGCATAGGAAAAGCCTCGTCAACTCTAATCGAAGTTTTATTATTAAACAACCAATTAACCGGTTGTCTTCCTTACGAAATAGGCTTCCTTCAAAACCTCGAACTTTTTGATGCTGGTGGTAATCTTTTAACAGGTCCATTACCATTATCATTTGGGTGTTTGAAGAAAGTTGAGCAGTTAAACTTAGCTAGGAACATGTTGTACGGCCAGGTTCCGGAAGTGGTTTGTGTGTTGGGGAATTTAGCGAATTTATCGCTGTCTTATAACTATTTTAATAGAGTTGGACCCTTGTGCAAGAAACTTATAAGAAGTGGTGTGCTTGATGTTAGCAAAAATTGTATTTTTTATCTTCCTGATCAGCGATCGATGCAAGAGTGTGTGAAGTTTTATGCATCTCGGAGAACTTGTGCGCGTTCTGGATCGTTTAATGTTACGCCTTGTCAAGTTCCTACACAGGGGAAACCTGGAACTAAGAGGAATTTGTTGTCATATTCTGCTCTTGAGAGAAACAGAGTTGTTCTGTAA 1230 0.3797 MALSKQHLVSFSITFLLCFNLVNSQILGPILSPLIPLIPDLLNFLDQRLAIVFPIIQAFKNTITSDPLGITSTWEGPDICNYTGFYCDNPPDNLTAITVASIDFNGFHLSAPSLDDFIDQLPDLAIFHANSNDFSGTISPKIASLKYLYELDLSNNLLSGTFPKSILNMPTLSFLDIRYNLFTGTVPQQIFTQTYLDAIFLNNNNFLQTLPNNLGQTTASYITFANNKFTGPIPPSIGKASSTLIEVLLLNNQLTGCLPYEIGFLQNLELFDAGGNLLTGPLPLSFGCLKKVEQLNLARNMLYGQVPEVVCVLGNLANLSLSYNYFNRVGPLCKKLIRSGVLDVSKNCIFYLPDQRSMQECVKFYASRRTCARSGSFNVTPCQVPTQGKPGTKRNLLSYSALERNRVVL 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01882 409 Gene3D Ribonuclease Inhibitor 55 218 IPR032675 -
Trre7g01882 409 SUPERFAMILY L domain-like 58 349 - -
Trre7g01882 409 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 116 210 - -
Trre7g01882 409 Gene3D Ribonuclease Inhibitor 219 368 IPR032675 -
Trre7g01882 409 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 40 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01882 Trre-Chr7 14687779 14689008 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g01882 44 377 Leucine-rich Repeat extension Gene Families AT3G24480 44.311 2.29e-86 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01882 - - gmx:100813314 579.711