Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01842 ATGAACTTCACTTGGGATGCAATGAGTGTAAAGCCACCTCTAACGAGCCAGTCTTCAATATGCTCCCTCACTTTTGATGAATTACAGAACACCATTGGTGGAGTTGGAAAAGATTTTGGATCAATGAACATGGATGAACTCTTGAAAAACATATGGAATGTTGAAGAGACACAAACCTTGACAGGAGTAGGAGTGGGAGAAGGACCTAACCCAATTGGTAATAATATGCAAAGACAGGGCTCATTGACATTGCCAAGGACACTTAGTCAGAAAAAAGTTGATGAAGTTTGGAGGGATTTGATGAAAGATAGTGGCAATAGCGGTTCGTCTATGCCTCAAAGACAACCAACATTAGGTGAAGTGACTTTGGAGGAGTTTTTGGTGAGAGCTGGTGTTGTGAAAGAAGATGCGCCGAATCATGCTCAACAAATCGAAAGACCAGATAATAATAAATGGTTTAGTGATTTTTCTCGATCAAACAATAACACCAATCTACTTCCCTTTCAACAACCAAATGGAAATAATGGTAATTTGAGTGACAATAATAACTTAGTGCCTAAACAAATTCCTATTCCTCCTTCATCGTTGAACCTGAATCAATCTCACCGGCCGCCACCACTTTTCCCGAAACCTACAAATGTAGCATTTACTGCTGCTCCTATTCATTTGTTAAACAATGCTCAACTTGGTAACCCTGGTAGAAGTGTAGTGCCTGCTGTTGGAATGTTTGGTTTATCTGCGGCGAATGTCGCAGCTCCTGTTGGTTCTCCAGGAAGTAAAATGTCGCCGGATGCAATTACAAAGCGTAATATAGATCCTTCTTTACCATCACCGGTTCCTTATGGAGTCAACAGAGGGAGGAAGTGTGGTGCTGTAGAAAAAGTTGTTGAAAGGAGACAAAGGAGAATGATAAAAAATAGAGAATCAGCTGCGAGGTCACGCGCTCGCAAACAGGCCTACACTGTTGAACTAGAGGCTGAAGTTGCAAAACTTAAGGAAGTAAATGAGGAATTACAAAGAAAACAGGCAGAACTTATGGAAATGCAGAAAAATAAGGAGGATCTGCTACGGACAAATAAAATAAAATTCTTGAGAAGGACACTTACAGGTCCATGGTAG 1119 0.4084 MNFTWDAMSVKPPLTSQSSICSLTFDELQNTIGGVGKDFGSMNMDELLKNIWNVEETQTLTGVGVGEGPNPIGNNMQRQGSLTLPRTLSQKKVDEVWRDLMKDSGNSGSSMPQRQPTLGEVTLEEFLVRAGVVKEDAPNHAQQIERPDNNKWFSDFSRSNNNTNLLPFQQPNGNNGNLSDNNNLVPKQIPIPPSSLNLNQSHRPPPLFPKPTNVAFTAAPIHLLNNAQLGNPGRSVVPAVGMFGLSAANVAAPVGSPGSKMSPDAITKRNIDPSLPSPVPYGVNRGRKCGAVEKVVERRQRRMIKNRESAARSRARKQAYTVELEAEVAKLKEVNEELQRKQAELMEMQKNKEDLLRTNKIKFLRRTLTGPW 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01842 372 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 301 316 IPR004827 GO:0003700|GO:0006355
Trre7g01842 372 Pfam bZIP transcription factor 298 353 IPR004827 GO:0003700|GO:0006355
Trre7g01842 372 MobiDBLite consensus disorder prediction 145 194 - -
Trre7g01842 372 Gene3D - 296 354 - -
Trre7g01842 372 SUPERFAMILY Leucine zipper domain 298 349 IPR046347 GO:0003700|GO:0006355
Trre7g01842 372 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 15 372 IPR043452 GO:0003700|GO:0045893
Trre7g01842 372 SMART brlzneu 294 358 IPR004827 GO:0003700|GO:0006355
Trre7g01842 372 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 5 296 353 - -
Trre7g01842 372 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 296 347 IPR004827 GO:0003700|GO:0006355
Trre7g01842 372 Coils Coil 317 358 - -
Trre7g01842 372 CDD bZIP_plant_BZIP46 298 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01842 Trre-Chr7 14346284 14347870 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g01842 13 372 bZIP Transcription Factor Family AT4G34000 45.662 5.56e-91 279
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Trre7g01842 bZIP_1 2.7e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01842 K14432 - gmx:100776600 442.195