Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01830 ATGGACATTATTATACTCCTCTTTCTTATCTTTCTCTCATCTCTCCTCTCATATCCATTCATAATCAAACACAATAAATTACATGAAACCATAGGCAAGCCTAAACATCCCCCAGGTTCAATGGGTTGGCCTTATATTGGAGAAACTTTTCAACTCTACTCTCAACACCCTAACATCTTCTTTGCTTCTAAACAAAAAAGATATGGAGAAATATTTAAAACACATATACTAGGATGTCCATGTGTGATGTTAGCAAGTCCTGAGGCTGCAAGATTTGTGTTGGTGACTCATTCTCATTTGTTTAAGCCTACATATTCCAAAAGCAAAGAGAAACTTATTGGTACCTCTGCATTGTTCTTTCACCAAGGACATTACCATACTCGCATTAGGAAACTCGTTCAAACCTCGCTTTCTCCTGAATCAATCAAGAAATTGATCCCCGGTATTGAAAGCGAAGTCATTTCCTCCTTGGAATCTTGGGTTTCTCCTGGACAAGTCGTTAACGCCTTCCATGAAATGAAAAAGTTCTCTTTCAATATTGGCATTCTCTCTATCTTTGGTAACTTGGAAAGCAATTATAGAGAACAACTTAAGGAGAATTACTGCATAGTAGAGAAAGGCTACAATTGTTTCCCAAATAAGATACCCGGAACTTCGTACTCCAAAGCTGTTTTGGCAAGGCAGAGAATTCAAGAGATTATAAGTGAGATAATTTGCAAAAGAAAGGAGCAAAGATCGATCGAAAAAGATCTGTTAGGCCACTTGCTAAACTACAAGAATGAAAAAGGTGAAATTTTAAGTGATGAGGAAATAGCTGATAATGTAATTGGAGTACTATTTGCAGCTCAAGATACTACAGCAAGTGTTTTGACTTGGATTCTCAAGTATCTTCATGATGACCAGAAACTTCTTGAAGCTATAAAAGCAGAACAAATGGTAGTATATGAAACCAATGATGGAGGGAGGATTCCATTGACATGGAGTAAGATAAAAAATATGCCACTTACTCATAGGGTAATATTGGAAAGTCTAAGGATGTCAAGTATTATATCATTTACTTTTAGAGAAGCTGTAGTTGATGTGGTATACAAAGGATATTTAATACCAAAGGGTTGGAAAGTAATGCCACTATTCAGAAACATCCATCATAATCCAGAATTCTACCCTGCTCCTCATAATTTTGACCCATCAAGGTTTGAGTTTGCTCCAAAGCCCAATACTTTTATGCCATTTGGCAATGGAGTGCACTCTTGCCCAGGAAATGAGCTAGCCAAATTGAATATGTTGATATTAATTCACCATCTAGTAACCAAATTTAGGTGGGAGGTAGTGGAAAATCGGAATGGAATCCAATACAGCCCATTCCCAATCCCTCTGCAAGGTCTACCCACAAGATTTTGCAGAATCAAATAG 1413 0.3723 MDIIILLFLIFLSSLLSYPFIIKHNKLHETIGKPKHPPGSMGWPYIGETFQLYSQHPNIFFASKQKRYGEIFKTHILGCPCVMLASPEAARFVLVTHSHLFKPTYSKSKEKLIGTSALFFHQGHYHTRIRKLVQTSLSPESIKKLIPGIESEVISSLESWVSPGQVVNAFHEMKKFSFNIGILSIFGNLESNYREQLKENYCIVEKGYNCFPNKIPGTSYSKAVLARQRIQEIISEIICKRKEQRSIEKDLLGHLLNYKNEKGEILSDEEIADNVIGVLFAAQDTTASVLTWILKYLHDDQKLLEAIKAEQMVVYETNDGGRIPLTWSKIKNMPLTHRVILESLRMSSIISFTFREAVVDVVYKGYLIPKGWKVMPLFRNIHHNPEFYPAPHNFDPSRFEFAPKPNTFMPFGNGVHSCPGNELAKLNMLILIHHLVTKFRWEVVENRNGIQYSPFPIPLQGLPTRFCRIK 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01830 470 FunFam Abscisic acid 8 26 468 - -
Trre7g01830 470 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g01830 470 PRINTS E-class P450 group I signature 270 287 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g01830 470 PRINTS E-class P450 group I signature 377 401 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g01830 470 PRINTS E-class P450 group I signature 418 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g01830 470 PRINTS E-class P450 group I signature 337 355 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g01830 470 PRINTS E-class P450 group I signature 408 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g01830 470 Gene3D Cytochrome P450 27 468 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g01830 470 PANTHER CYTOCHROME P450 26 35 454 - -
Trre7g01830 470 Pfam Cytochrome P450 37 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g01830 470 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 411 420 IPR017972 GO:0005506|GO:0016705
Trre7g01830 470 SUPERFAMILY Cytochrome P450 33 466 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g01830 470 PRINTS P450 superfamily signature 281 298 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g01830 470 PRINTS P450 superfamily signature 418 429 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g01830 470 PRINTS P450 superfamily signature 338 349 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g01830 470 PRINTS P450 superfamily signature 409 418 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g01830 470 CDD CYP90-like 65 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01830 Trre-Chr7 14230401 14233603 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g01830 2 468 Cytochrome P450 AT3G19270 68.308 0.0 672
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01830 K09843 - gmx:100793868 803.127