Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01800 ATGGCTGATTGCAAACGCGCTTCTCCAACAATTCTACCTATCAACGACTCTTCTCCAAACGGAACCTCCATCTCCAAGAAAAGAAAACTTACTCCTTCTGCTTCGCATTTACTAGCTTCTGAAATGCAACACCAAATTCCTAACTCGCTCACTGACTCACCGGAAAAAACTAAATCAACGGTCAATTCCACTGTCGCAGTGGCTTCCAACGGAATTTCCTCAGATCACAGCCTACTTACGTCTCGCTTCAGCTCTAGCAAGCTTACGGAAAACGATGACGTCGTTAAGGAGCTCGATACCACGCCGTTAGATCCCGAGCTGAAAACGGTAGATTCAAAAGCAACGAAACGCAATTTGAGATCGTTCAGGGAGGAAGAGATTGATGAATTCTTTGCAAGATTTGAGAGGGAAGAGCAGAAAAGATTTGCAGAGAAGTACAACTTTGATATTGTTAGTGATTTGCCGTTAGAGGGTCGTTACGAGTGGGTTCGTTTACATTGA 501 0.4411 MADCKRASPTILPINDSSPNGTSISKKRKLTPSASHLLASEMQHQIPNSLTDSPEKTKSTVNSTVAVASNGISSDHSLLTSRFSSSKLTENDDVVKELDTTPLDPELKTVDSKATKRNLRSFREEEIDEFFARFEREEQKRFAEKYNFDIVSDLPLEGRYEWVRLH 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01800 166 Gene3D p27 111 166 IPR044898 -
Trre7g01800 166 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 4-RELATED 52 165 IPR044275 GO:0004861|GO:0045736|GO:0051726
Trre7g01800 166 Pfam Cyclin-dependent kinase inhibitor 124 165 IPR003175 GO:0004861|GO:0005634|GO:0051726
Trre7g01800 166 MobiDBLite consensus disorder prediction 11 62 - -
Trre7g01800 166 MobiDBLite consensus disorder prediction 1 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01800 Trre-Chr7 14016429 14017500 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g01800 126 165 Core Cell Cycle Gene Families AT1G49620 70.000 2.86e-15 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01800 - - tpra:123924291 254.603